Important! Template update for nf-core/tools v4.0.2 #258
CaroAMNAnnotations
5 errors and 13 warnings
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GPU Test | docker | 2 | 25.10.3 | pipeline
Process completed with exit code 1.
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GPU Test | singularity | 1 | 25.10.3 | pipeline
Process completed with exit code 1.
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GPU Test | docker | 1 | 25.10.3 | pipeline
Process completed with exit code 1.
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GPU Test | singularity | 2 | 25.10.3 | pipeline
Process completed with exit code 1.
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confirm-pass
Process completed with exit code 1.
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Get Shards
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@0ad4b8fadaa221de15dcec353f45205ec38ea70b. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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GPU Test | docker | 2 | 25.10.3 | pipeline
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@0ad4b8fadaa221de15dcec353f45205ec38ea70b. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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GPU Test | docker | 2 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | docker | 2 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | singularity | 1 | 25.10.3 | pipeline
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@0ad4b8fadaa221de15dcec353f45205ec38ea70b, eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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GPU Test | singularity | 1 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | singularity | 1 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | docker | 1 | 25.10.3 | pipeline
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@0ad4b8fadaa221de15dcec353f45205ec38ea70b. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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GPU Test | docker | 1 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | docker | 1 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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|
GPU Test | singularity | 2 | 25.10.3 | pipeline
Node.js 20 actions are deprecated. The following actions are running on Node.js 20 and may not work as expected: actions/checkout@0ad4b8fadaa221de15dcec353f45205ec38ea70b, eWaterCycle/setup-apptainer@3f706d898c9db585b1d741b4692e66755f3a1b40. Actions will be forced to run with Node.js 24 by default starting June 16th, 2026. Node.js 20 will be removed from the runner on September 16th, 2026. Please check if updated versions of these actions are available that support Node.js 24. To opt into Node.js 24 now, set the FORCE_JAVASCRIPT_ACTIONS_TO_NODE24=true environment variable on the runner or in your workflow file. Once Node.js 24 becomes the default, you can temporarily opt out by setting ACTIONS_ALLOW_USE_UNSECURE_NODE_VERSION=true. For more information see: https://github.blog/changelog/2025-09-19-deprecation-of-node-20-on-github-actions-runners/
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GPU Test | singularity | 2 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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GPU Test | singularity | 2 | 25.10.3 | pipeline
Unexpected input(s) 'filters', valid inputs are ['profile', 'shard', 'total_shards', 'paths', 'tags']
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