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update nextflow_schema with new parameter
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nextflow_schema.json

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"help_text": "Performs Allen Reference Atlas registration of stitched images. This step is optional and can be skipped if the images are already registered.",
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"fa_icon": "fas fa-file-image"
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},
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"model_file": {
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"type": "string",
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"description": "Path to the pre-trained model file.",
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"help_text": "Path to the pre-trained model file for cell nuclei segmentation. It can be a local file path or the default is the URL to the model stored at Zenodo.",
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"fa_icon": "fas fa-file-image"
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},
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"email": {
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"type": "string",
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"description": "Email address for completion summary.",

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