Update workflows/nanostring.nf

apeltzer · grst · web-flow · commit 47d1818fdc31 · 2025-05-14T10:33:24.000+02:00
Co-authored-by: Gregor Sturm &lt;mail@gregor-sturm.de&gt;
diff --git a/workflows/nanostring.nf b/workflows/nanostring.nf
@@ -79,7 +79,7 @@ workflow NANOSTRING {
         samplesheet_path.first()
     )
     ch_versions      = ch_versions.mix(NACHO_QC.out.versions)
-    nacho_qc_multiqc_metrics = NACHO_QC.out.nacho_qc_png.map{it[1]}.mix(NACHO_QC.out.nacho_qc_txt.map{it[1]})
+    ch_nacho_qc_multiqc_metrics = NACHO_QC.out.nacho_qc_png.map{it[1]}.mix(NACHO_QC.out.nacho_qc_txt.map{it[1]})
     ch_multiqc_files = ch_multiqc_files.mix(nacho_qc_multiqc_metrics.collect())
 
     //

Original file line number	Diff line number	Diff line change
`@@ -79,7 +79,7 @@ workflow NANOSTRING {`
`79`	`79`	`samplesheet_path.first()`
`80`	`80`	`)`
`81`	`81`	`ch_versions = ch_versions.mix(NACHO_QC.out.versions)`
`82`		`- nacho_qc_multiqc_metrics = NACHO_QC.out.nacho_qc_png.map{it[1]}.mix(NACHO_QC.out.nacho_qc_txt.map{it[1]})`
	`82`	`+ ch_nacho_qc_multiqc_metrics = NACHO_QC.out.nacho_qc_png.map{it[1]}.mix(NACHO_QC.out.nacho_qc_txt.map{it[1]})`
`83`	`83`	`ch_multiqc_files = ch_multiqc_files.mix(nacho_qc_multiqc_metrics.collect())`
`84`	`84`
`85`	`85`	`//`