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Use CRAM 3.1 #86

@charles-plessy

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@charles-plessy

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Samtools 1.22 defaults to version 3.1 of the CRAM format. It is said that it can reduce space usage by ~10 %. In order to use it, we need to wait that htsjdk supports this format, because it is used in nf-test for the last/mafconvert CI.

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