Skip to content

Commit cc03b83

Browse files
committed
Fix workflow
1 parent 24afeb8 commit cc03b83

File tree

1 file changed

+0
-5
lines changed

1 file changed

+0
-5
lines changed

workflows/phaseimpute/main.nf

Lines changed: 0 additions & 5 deletions
Original file line numberDiff line numberDiff line change
@@ -36,11 +36,6 @@ include { VCF_CONCATENATE_BCFTOOLS as CONCAT_PANEL } from '../../subworkflows/
3636
include { BCFTOOLS_STATS as BCFTOOLS_STATS_PANEL } from '../../modules/nf-core/bcftools/stats'
3737
include { chunkPrepareChannel } from './function.nf'
3838

39-
//Target phasing
40-
41-
include { VCF_PHASE_SHAPEIT5 as VCF_PHASE_TARGET } from '../../subworkflows/local/vcf_phase_shapeit5'
42-
include { VCF_CHUNK_GLIMPSE as TARGET_CHUNK } from '../../subworkflows/local/vcf_chunk_glimpse'
43-
4439
// Imputation
4540
include { LISTTOFILE } from '../../modules/local/listtofile'
4641
include { BCFTOOLS_QUERY as BCFTOOLS_QUERY_IMPUTED } from '../../modules/nf-core/bcftools/query'

0 commit comments

Comments
 (0)