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Nextflow lint results

  • Generated: 2026-03-17T00:23:40.307802209Z
  • Nextflow version: 26.02.0-edge
  • Summary: 7 warnings

⚠️ Warnings

  • Warning: modules/nf-core/plink/gwas/main.nf:33:9: Variable was declared but not used

        def outmeta = ""
            ^^^^^^^
  • Warning: modules/nf-core/plink/gwas/main.nf:64:9: Variable was declared but not used

        def args = task.ext.args ?: ''
            ^^^^
  • Warning: modules/nf-core/plink/gwas/main.nf:69:9: Variable was declared but not used

        def outmeta = ""
            ^^^^^^^
  • Warning: modules/nf-core/plink/vcf/main.nf:44:9: Variable was declared but not used

        def args = task.ext.args ?: ''
            ^^^^
  • Warning: subworkflows/local/utils_nfcore_gwas_pipeline/main.nf:32:5: Parameter was not used -- prefix with _ to suppress warning

        monochrome_logs   // boolean: Do not use coloured log outputs
        ^^^^^^^^^^^^^^^
  • Warning: subworkflows/local/utils_nfcore_gwas_pipeline/main.nf:35:5: Parameter was not used -- prefix with _ to suppress warning

        input             //  string: Path to input samplesheet
        ^^^^^
  • Warning: workflows/gwas.nf:67:26: The use of Channel to access channel factories is deprecated -- use channel instead

        def topic_versions = Channel.topic("versions")
                             ^^^^^^^