From 01d57408fcb1c9be187314b27f2baa5249c86e0b Mon Sep 17 00:00:00 2001
From: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
Date: Wed, 19 Aug 2026 11:16:15 +0200
Subject: [PATCH 1/2] Add basePackages to container metadata

---
 nf_core/modules/containers.py | 1 +
 1 file changed, 1 insertion(+)

diff --git a/nf_core/modules/containers.py b/nf_core/modules/containers.py
index f3788f1053..0b476e3dc2 100644
--- a/nf_core/modules/containers.py
+++ b/nf_core/modules/containers.py
@@ -703,6 +703,7 @@ def request_container(
             "containerPlatform": platform,
             "freeze": True,
             "buildTemplate": "conda/pixi:v1",
+            "basePackages": "littler r-cran-docopt",
             "format": WAVE_FORMAT[container_system],
             "nameStrategy": "imageSuffix",
         }

From 2be8a99ce91a6f53d861db66b3fc82849ec23638 Mon Sep 17 00:00:00 2001
From: Matthias De Smet <11850640+matthdsm@users.noreply.github.com>
Date: Wed, 19 Aug 2026 11:28:56 +0200
Subject: [PATCH 2/2] fix copy paste error

---
 nf_core/modules/containers.py | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/nf_core/modules/containers.py b/nf_core/modules/containers.py
index 0b476e3dc2..74496f6304 100644
--- a/nf_core/modules/containers.py
+++ b/nf_core/modules/containers.py
@@ -703,7 +703,7 @@ def request_container(
             "containerPlatform": platform,
             "freeze": True,
             "buildTemplate": "conda/pixi:v1",
-            "basePackages": "littler r-cran-docopt",
+            "basePackages": "conda-forge::procps conda-forge::gzip",
             "format": WAVE_FORMAT[container_system],
             "nameStrategy": "imageSuffix",
         }