SCENIC/DESCRIPTION at master · nghiemdangvo/SCENIC · GitHub

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Package: SCENIC
Type: Package
Title: SCENIC (Single Cell rEgulatory Network Inference and Clustering)
Version: 1.3.1
Date: 2022-05-02
Author: Sara Aibar, Carmen Bravo, Stein Aerts.
  Laboratory of Computational Biology, KU Leuven Center for Human Genetics.
  Leuven, Belgium.
Maintainer: Sara Aibar <sara.aibar@kuleuven.vib.be>
Description: SCENIC workflow
URL: http://scenic.aertslab.org
Imports:
  data.table,
  GENIE3 (>= 1.10.0),
  RcisTarget (>= 1.16.0),
  AUCell (>= 1.10.0),
  NMF,
  dynamicTreeCut,
  mixtools,
  Rtsne
Enhances: doMC, doRNG
Suggests:
  SingleCellExperiment,
  GEOquery,
  R2HTML,
  SCopeLoomR (>= 0.10.1),
  hdf5r,
  rbokeh,
  DT,
  plotly,
  BiocStyle,
  knitr,
  pheatmap,
  rmarkdown
License: file LICENSE
biocViews: SingleCell
LazyData: TRUE
VignetteBuilder: knitr
RoxygenNote: 7.1.2
Encoding: UTF-8