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Send errors to stderr more consistently #1781

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@dmd

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@dmd

In #1780 I happened to notice Saving crash info to /data/ddrucker/testing/derivatives/fmriprep/sub-acj/log/20190917-102450_234554e0-3572-4773-9070-09ebb07bea01/crash-20190917-103025-ddrucker-bids_info-5eccfd72-fb37-442c-82d0-d2127cde5582.txt scrolling by, but if I hadn't been watching carefully, I would have missed it, as it was on stdout.

It would be nice if things that are clearly errors were consistently sent to stderr.

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