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What happened?
This is not a big problem but the naming used for some tests is supposed to be bids valid.
260205-21:39:56,518 nipype.workflow INFO:
Setting up fieldmap "sub_3325_ses_1a_task_partlycloudy_acq_PC+HyperMEPI+RPE" (EstimatorType.PEPOLAR) with <sub-3325_ses-1a_acq-spin+echo_dir-AP_epi.nii.gz, sub-3325_ses-1a_acq-spin+echo_dir-PA_epi.nii.gz>
Process Process-2:
Traceback (most recent call last):
File "/app/.pixi/envs/fmriprep/lib/python3.12/multiprocessing/process.py", line 314, in _bootstrap
self.run()
File "/app/.pixi/envs/fmriprep/lib/python3.12/multiprocessing/process.py", line 108, in run
self._target(*self._args, **self._kwargs)
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/fmriprep/cli/workflow.py", line 116, in build_workflow
retval['workflow'] = init_fmriprep_wf()
^^^^^^^^^^^^^^^^^^
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/fmriprep/workflows/base.py", line 108, in init_fmriprep_wf
single_subject_wf = init_single_subject_wf(subject_id, sessions, name=wf_name)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/fmriprep/workflows/base.py", line 871, in init_single_subject_wf
bold_wf = init_bold_wf(
^^^^^^^^^^^^^
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/fmriprep/workflows/bold/base.py", line 191, in init_bold_wf
workflow = Workflow(name=_get_wf_name(bold_file, 'bold'))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/niworkflows/engine/workflows.py", line 47, in __init__
super().__init__(name, base_dir)
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/nipype/pipeline/engine/workflows.py", line 58, in __init__
super().__init__(name, base_dir)
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/nipype/pipeline/engine/base.py", line 35, in __init__
self.name = name
^^^^^^^^^
File "/app/.pixi/envs/fmriprep/lib/python3.12/site-packages/nipype/pipeline/engine/base.py", line 51, in name
raise ValueError('[Workflow|Node] name "%s" is not valid.' % name)
ValueError: [Workflow|Node] name "bold_ses_1a_task_partlycloudy_acq_PC+HyperMEPI+RPE_echo_1_wf" is not valid.
The issue comes from:
where the pattern does not accept + in the suffixes.
Relevant to #3604
What command did you use?
/app/.pixi/envs/fmriprep/bin/fmriprep /data/hp_proc/cleaned_bids /data/hp_proc/cleaned_bids/derivatives/fmriprep participant --skip-bids-validation --participant-label xxxxxxx --session-label 1a --stop-on-first-crash --debug all --me-t2s-fit-method loglin --me-output-echos -w /data/hp_proc/work/xxxxxx --use-syn-sdc error --dummy-scans 8 --n_cpus 16 --nprocs 16 --omp-nthreads 16 --fs-license-file /home/milton.camachocamach/license.txtWhat version of fMRIPrep are you running?
25.2.4
How are you running fMRIPrep?
Docker
Is your data BIDS valid?
Yes
Are you reusing any previously computed results?
No
Please copy and paste any relevant log output.
Additional information / screenshots
No response
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