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Update Dockerfile
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install/Dockerfile.mindboggle.complete

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@@ -102,7 +102,7 @@ RUN apt-get update -qq && \
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# PATH=$FREESURFER_HOME/bin:$FSFAST_HOME/bin:$FREESURFER_HOME/tktools:$MINC_BIN_DIR:$PATH
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#-----------------------------------------------------------------------------
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# Install ANTS
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# Install ANTS (tags/v2.1.0rc3)
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#-----------------------------------------------------------------------------
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# USER root
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# RUN apt-get update -qq && apt-get install -yq --no-install-recommends \
@@ -113,7 +113,7 @@ RUN apt-get update -qq && \
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# WORKDIR /tmp
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# RUN git clone https://github.com/stnava/ANTs.git && \
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# cd ANTs && \
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# git checkout 767f756bc0e423cd503a24c806b6578aaeb5b82f && \
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# git checkout tags/v2.1.0rc3 && \
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# mkdir build && cd build && cmake .. && make && \
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# mkdir -p /opt/ants && \
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# cp bin/* /opt/ants && cp ../Scripts/* /opt/ants && \
@@ -174,7 +174,7 @@ RUN apt-get update -qq && \
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rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/*
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#-----------------------------------------------------------------------------
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# Install nipype
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# Install nipype (git checkout 368e1844b164b599496db817f095c53c72332b9f)
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#-----------------------------------------------------------------------------
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USER $NB_USER
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RUN git clone https://github.com/nipy/nipype && \
@@ -212,6 +212,7 @@ RUN curl -sSL https://osf.io/rh9km/?action=download\&version=2 -o templates.zip
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#-----------------------------------------------------------------------------
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# Install roygbiv for mindboggle output visualization
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# (git checkout 368e1844b164b599496db817f095c53c72332b9f)
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#-----------------------------------------------------------------------------
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USER $NB_USER
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WORKDIR /opt/src

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