Unofficial fork of the protein structure alignment tool Caretta. Launch the web app or use the caretta-cli on any platform using Docker.
For official release and documentation see: https://github.com/TurtleTools/caretta
Git clone and navigate to the directory
git clone https://github.com/noxjonas/caretta.git
cd caretta
To build docker image run:
docker-compose -f .docker/docker-dompose.yml build
To start the container run:
docker-compose -f .docker/docker-compose.yml up -d
Navigate to http://localhost:8091 for the web app.
Or take a look at an example python wrapper class.
python .docker/wrapper.py <path-to-caretta> "--help"
Note that you need to link your system storage with the container in order to use the cli.
Do so by editing the volumes: field in the .docker/docker-compose.yml file.