diff --git a/backend-services/.env b/backend-services/.env new file mode 100644 index 0000000..6eaa608 --- /dev/null +++ b/backend-services/.env @@ -0,0 +1,4 @@ +PRIMARY_ORIGIN="http://www.localhost:8000" +VAULT_DB_CONNECTION_STRING="mongodb://ntls:Mw6fvOK3BQCyPYKsw7OjMFrwdWBNrWE9S3edoJWNsxp34jtDnDTfwZCXAIw4uQE1NWHxRPC0AcVuACDbM3LMQg==@ntls.mongo.cosmos.azure.com:10255/?ssl=true&replicaSet=globaldb&retrywrites=false&maxIdleTimeMS=120000&appName=@ntls@" +VAULT_DB_NAME="vault" +VAULT_DB_BOOKMARK_COLLECTION_NAME="datasets" diff --git a/backend-services/.gitignore b/backend-services/.gitignore new file mode 100644 index 0000000..21dc89c --- /dev/null +++ b/backend-services/.gitignore @@ -0,0 +1,6 @@ +__pycache__ +/.env +/.mypy_cache +/.python-version +/.tox +/dist \ No newline at end of file diff --git a/backend-services/README.md b/backend-services/README.md new file mode 100644 index 0000000..58250e8 --- /dev/null +++ b/backend-services/README.md @@ -0,0 +1,110 @@ +# Wallet Backend Services + +An HTTP server backend for the Nautilus Wallet powered by [FastAPI][fastapi] and +the [uvicorn ASGI server][uvicorn]. + +- [Setup](#setup) +- [Quick Start](#quick-start) + +[fastapi]: https://fastapi.tiangolo.com/ +[uvicorn]: https://www.uvicorn.org/ + +## Setup + +In order to proceed, one needs to have the `poetry` dependency management and +packaging tool installed. Unless a recent version is available via your OS +package manager, as it would be on Arch Linux and friends :), the recommended +means of installing `poetry` is via the well-established `pipx` tool as +described in [their documentation][pipx-install]. + +Once `pipx` is installed, installing `poetry` is as simple as + +```shell +pipx install poetry +``` + +If you are simply looking for the API docs you may now skip ahead to the +[following section][#quick-start], you should also install the `pyenv` tool as +it is invaluable in managing your project-specific and shell-specific virtual +environments. This is again as simple as + +```shell +pipx install pyenv +``` + +If you use `bash` as your shell then copy the following to your +`~/.bash_profile`, if it exists, or otherwise to `~/.profile` + +```bash +# you may ignore this line if it is already set in your config +export XDG_DATA_HOME="$HOME/.local/share" + +export PYENV_ROOT="$XDG_DATA_HOME/pyenv" +command -v pyenv >/dev/null || export PATH="$PYENV_ROOT/bin:$PATH" +eval "$(pyenv init -)" +``` + +and copy the same last line to your `~/.bashrc` + +```bash +eval "$(pyenv init -)" +``` + +Make sure to log out (and back in of course) or, alternatively, restart your +machine. Once you are back in the `backend-services` sub-directory of the +project run + +```shell +pyenv local 3.{10,11} +``` + +[pipx-install]: https://python-poetry.org/docs/#installation + +## Quick Start + +In the root of the Python project, where the `pyproject.toml` is located, run +the following command: + +```shell +poetry install +``` + +Make sure the following environment variables have been set in your local `.env` file: + +- `WALLET_DB_CONNECTION_STRING` +- `WALLET_DB_DATABASE_NAME` +- `WALLET_BOOKMARK_DB_COLLECTION_NAME` + +For examples you may consult the [python-dotenv] documentation. Once this is done, a local instance of the server may be started on `localhost:8000` by running + +```shell +poetry run uvicorn web_asgi.main:app +``` + +The **Swagger/OpenAPI documentation** for this server is now accessible via +[localhost][localhost-docs]. + +If you would like to run the tests for the project locally, simply invoke + +```shell +poetry run tox +``` + +Note that `poetry` creates and keeps track of project-related `python` virtual +environments on your behalf via your IDE (an IDE plugin might be necessary) or +from the command line. Run + +```shell +poetry env info +``` + +for details about available environments for your current project. If you would +like to spawn a shell inside the current `poetry` virtual environment this may +be done via + +```shell +poetry shell +``` + +[localhost-docs]: http://localhost:8000/docs +[python-dotenv]: https://github.com/theskumar/python-dotenv#getting-started diff --git a/backend-services/poetry.lock b/backend-services/poetry.lock new file mode 100644 index 0000000..339e00e --- /dev/null +++ b/backend-services/poetry.lock @@ -0,0 +1,2446 @@ +[[package]] +name = "anyio" +version = "3.6.2" +description = "High level compatibility layer for multiple asynchronous event loop implementations" +category = "main" +optional = false +python-versions = ">=3.6.2" + +[package.dependencies] +idna = ">=2.8" +sniffio = ">=1.1" + +[package.extras] +doc = ["packaging", "sphinx-autodoc-typehints (>=1.2.0)", "sphinx-rtd-theme"] +test = ["contextlib2", "coverage[toml] (>=4.5)", "hypothesis (>=4.0)", "mock (>=4)", "pytest (>=7.0)", "pytest-mock (>=3.6.1)", "trustme", "uvloop (<0.15)", "uvloop (>=0.15)"] +trio = ["trio (>=0.16,<0.22)"] + +[[package]] +name = "asttokens" +version = "2.2.1" +description = "Annotate AST trees with source code positions" +category = "dev" +optional = false +python-versions = "*" + +[package.dependencies] +six = "*" + +[package.extras] +test = ["astroid", "pytest"] + +[[package]] +name = "attrs" +version = "22.2.0" +description = "Classes Without Boilerplate" +category = "dev" +optional = false +python-versions = ">=3.6" + +[package.extras] +cov = ["attrs[tests]", "coverage-enable-subprocess", "coverage[toml] (>=5.3)"] +dev = ["attrs[docs,tests]"] +docs = ["furo", "myst-parser", "sphinx", "sphinx-notfound-page", "sphinxcontrib-towncrier", "towncrier", "zope.interface"] +tests = ["attrs[tests-no-zope]", "zope.interface"] +tests-no-zope = ["cloudpickle", "cloudpickle", "hypothesis", "hypothesis", "mypy (>=0.971,<0.990)", "mypy (>=0.971,<0.990)", "pympler", "pympler", "pytest (>=4.3.0)", "pytest (>=4.3.0)", "pytest-mypy-plugins", "pytest-mypy-plugins", "pytest-xdist[psutil]", "pytest-xdist[psutil]"] + +[[package]] +name = "bandit" +version = "1.7.4" +description = "Security oriented static analyser for python code." +category = "dev" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +colorama = {version = ">=0.3.9", markers = "platform_system == \"Windows\""} +GitPython = ">=1.0.1" +PyYAML = ">=5.3.1" +stevedore = ">=1.20.0" + +[package.extras] +test = ["beautifulsoup4 (>=4.8.0)", "coverage (>=4.5.4)", "fixtures (>=3.0.0)", "flake8 (>=4.0.0)", "pylint (==1.9.4)", "stestr (>=2.5.0)", "testscenarios (>=0.5.0)", "testtools (>=2.3.0)", "toml"] +toml = ["toml"] +yaml = ["PyYAML"] + +[[package]] +name = "black" +version = "22.12.0" +description = "The uncompromising code formatter." +category = "dev" +optional = false +python-versions = ">=3.7" + +[package.dependencies] +click = ">=8.0.0" +mypy-extensions = ">=0.4.3" +pathspec = ">=0.9.0" +platformdirs = ">=2" +tomli = {version = ">=1.1.0", markers = "python_full_version < \"3.11.0a7\""} + +[package.extras] +colorama = ["colorama (>=0.4.3)"] +d = ["aiohttp (>=3.7.4)"] +jupyter = ["ipython (>=7.8.0)", "tokenize-rt (>=3.2.0)"] +uvloop = ["uvloop (>=0.15.2)"] + +[[package]] +name = "cachecontrol" +version = "0.12.11" +description = "httplib2 caching for requests" +category = "dev" +optional = false +python-versions = ">=3.6" + +[package.dependencies] +lockfile = {version = ">=0.9", optional = true, markers = "extra == \"filecache\""} +msgpack = ">=0.5.2" +requests = "*" + +[package.extras] +filecache = ["lockfile (>=0.9)"] +redis = ["redis (>=2.10.5)"] + +[[package]] +name = "cachy" +version = "0.3.0" +description = "Cachy provides a simple yet effective caching library." +category = "dev" +optional = false +python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" + +[package.extras] +memcached = ["python-memcached (>=1.59,<2.0)"] +msgpack = ["msgpack-python (>=0.5,<0.6)"] +redis = ["redis (>=3.3.6,<4.0.0)"] + +[[package]] +name = "certifi" +version = "2022.12.7" +description = "Python package for providing Mozilla's CA Bundle." +category = "dev" +optional = false +python-versions = ">=3.6" + +[[package]] +name = "cffi" +version = "1.15.1" +description = "Foreign Function Interface for Python calling C code." +category = "dev" +optional = false +python-versions = "*" + +[package.dependencies] +pycparser = "*" + +[[package]] +name = "charset-normalizer" +version = "3.0.1" +description = "The Real First Universal Charset Detector. 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"^0.0.166" + +[build-system] +requires = ["poetry-core"] +build-backend = "poetry.core.masonry.api" + +[tool.isort] +profile = "black" + +[tool.mypy] +plugins = [ + "pydantic.mypy" +] + +follow_imports = "silent" +warn_redundant_casts = true +warn_unused_ignores = true +disallow_any_generics = true +check_untyped_defs = true +no_implicit_reexport = true + +disallow_untyped_defs = true + +[tool.pydantic-mypy] +init_forbid_extra = true +init_typed = true +warn_required_dynamic_aliases = true +warn_untyped_fields = true + +[tool.ruff] +# start with the rules used by `fastapi` +select = [ + "E", # pycodestyle errors + "W", # pycodestyle warnings + "F", # pyflakes + "C", # flake8-comprehensions + "B", # flake8-bugbear +] +# start with the ignores used by `fastapi` +ignore = [ + "E501", # line too long, handled by black + "B008", # do not perform function calls in argument defaults + "C901", # too complex +] +# our additional lint checks +extend-select = [ + "UP", # modern syntax + "N", # naming conforms to PEP8 + "ANN", # type annotations + "BLE", # blind exceptions + "FBT", # booleans traps + "A", # clashes with python builtins + "T", # left-over debugging + "Q", # uniform quotes + "RET", # function returns + "I25", # tidy imports + "ERA", # commented code + "PLC", # pylint checks + "RUF", # ruff-specific checks +] +# Assume Python 3.10. +target-version = "py310" diff --git a/backend-services/schema_files/alumni_salary.json b/backend-services/schema_files/alumni_salary.json new file mode 100644 index 0000000..d26528f --- /dev/null +++ b/backend-services/schema_files/alumni_salary.json @@ -0,0 +1,110 @@ +[ + { + "name": "John Smith", + "gpa": 3.5, + "age": 25, + "salary": 50000 + }, + { + "name": "Jane Doe", + "gpa": 3.2, + "age": 22, + "salary": 45000 + }, + { + "name": "Bob Johnson", + "gpa": 3.8, + "age": 30, + "salary": 55000 + }, + { + "name": "Sara Lee", + "gpa": 3.0, + "age": 27, + "salary": 40000 + }, + { + "name": "Tom Brown", + "gpa": 3.7, + "age": 32, + "salary": 60000 + }, + { + "name": "Emily Davis", + "gpa": 3.4, + "age": 23, + "salary": 42000 + }, + { + "name": "Michael Miller", + "gpa": 3.9, + "age": 28, + "salary": 65000 + }, + { + "name": "Jessica Wilson", + "gpa": 3.1, + "age": 24, + "salary": 46000 + }, + { + "name": "Matthew Anderson", + "gpa": 3.6, + "age": 29, + "salary": 58000 + }, + { + "name": "Nicholas Thompson", + "gpa": 3.3, + "age": 26, + "salary": 49000 + }, + { + "name": "Ashley Moore", + "gpa": 3.8, + "age": 35, + "salary": 62000 + }, + { + "name": "David Taylor", + "gpa": 3.0, + "age": 31, + "salary": 52000 + }, + { + "name": "Joseph Hernandez", + "gpa": 3.7, + "age": 33, + "salary": 57000 + }, + { + "name": "Brian Martinez", + "gpa": 3.4, + "age": 30, + "salary": 50000 + }, + { + "name": "Brandon Lee", + "gpa": 3.9, + "age": 25, + "salary": 60000 + }, + { + "name": "Adam Clark", + "gpa": 3.1, + "age": 22, + "salary": 45000 + }, + { + "name": "Natalie Rodriguez", + "gpa": 3.6, + "age": 27, + "salary": 48000 + }, + { + "name": "Justin Green", + "gpa": 3.3, + "age": 32, + "salary": 55000 + } +] diff --git a/backend-services/schema_files/alumni_salary_scheme.json b/backend-services/schema_files/alumni_salary_scheme.json new file mode 100644 index 0000000..a15bb6c --- /dev/null +++ b/backend-services/schema_files/alumni_salary_scheme.json @@ -0,0 +1,9 @@ +schema = { + "type": "object", + "properties": { + "name": {"type": "string"}, + "gpa": {"type": "number"}, + "age": {"type": "number"}, + "salary": {"type": "number"}, + }, +} \ No newline at end of file diff --git a/backend-services/schema_files/customer_accounts.json b/backend-services/schema_files/customer_accounts.json new file mode 100644 index 0000000..7bf9e4c --- /dev/null +++ b/backend-services/schema_files/customer_accounts.json @@ -0,0 +1,37 @@ +[ + { + "Name": "John Smith", + "Email": "johnsmith@email.com", + "Account": 25098313, + "Balance": 50000, + "Credit Score": 300 + }, + { + "name": "Jane Doe", + "Email": "janedoe@email.com", + "Account": 25023515, + "Balance": 20500, + "Credit Score": 290 + }, + { + "name": "Bob Johnson", + "Email": "bobjohnson@email.com", + "Account": 25092814, + "Balance": 24000, + "Credit Score": 200 + }, + { + "name": "Sara Lee", + "Email": "saralee@email.com", + "Account": 25068194, + "Balance": 54000, + "Credit Score": 302 + }, + { + "name": "Tom Brown", + "Email": "tombrown@email.com", + "Account": 25020920, + "Balance": 33000, + "Credit Score": 360 + } +] diff --git a/backend-services/schema_files/customer_accounts_schema.json b/backend-services/schema_files/customer_accounts_schema.json new file mode 100644 index 0000000..7e691a8 --- /dev/null +++ b/backend-services/schema_files/customer_accounts_schema.json @@ -0,0 +1,10 @@ +{ + "type": "object", + "properties": { + "Name": {"type": "string"}, + "Email": {"type": "string"}, + "Account": {"type": "number"}, + "Balance": {"type": "number"}, + "Credit Score": {"type": "number"}, + }, +} \ No newline at end of file diff --git a/backend-services/schema_files/example-validation.ipynb b/backend-services/schema_files/example-validation.ipynb new file mode 100644 index 0000000..1d79bf1 --- /dev/null +++ b/backend-services/schema_files/example-validation.ipynb @@ -0,0 +1,511 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "id": "7009a50c", + "metadata": {}, + "source": [ + "# JSON Schema Validation\n", + "\n", + "Play with schema validation using the json-schema language. This notebook uses the jsonschema library, https://github.com/python-jsonschema/jsonschema. " + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "id": "af47689b", + "metadata": {}, + "outputs": [], + "source": [ + "import sys" + ] + }, + { + "cell_type": "code", + "execution_count": 6, + "id": "dfeccff0", + "metadata": {}, + "outputs": [], + "source": [ + "import json" + ] + }, + { + "cell_type": "code", + "execution_count": 3, + "id": "53749d68", + "metadata": {}, + "outputs": [], + "source": [ + "import pandas as pd" + ] + }, + { + "cell_type": "code", + "execution_count": 14, + "id": "7b1daffd", + "metadata": {}, + "outputs": [], + "source": [ + "import jsonschema" + ] + }, + { + "cell_type": "code", + "execution_count": 16, + "id": "e76ef7df", + "metadata": {}, + "outputs": [], + "source": [ + "from jsonschema import validate" + ] + }, + { + "cell_type": "code", + "execution_count": 64, + "id": "32841f60", + "metadata": {}, + "outputs": [], + "source": [ + "data=pd.read_csv('mock_genotype.tsv',sep='\\t')" + ] + }, + { + "cell_type": "code", + "execution_count": 41, + "id": "d8093c88", + "metadata": {}, + "outputs": [], + "source": [ + "schema = {\n", + " \"type\": \"object\",\n", + " \"properties\": {\n", + " \"FID\": {\"type\": \"number\"},\n", + " \"IID\": {\"type\": \"string\"},\n", + " \"Miss_Pheno\": {\"type\": \"number\"},\n", + " \"N_Miss\": {\"type\": \"number\"},\n", + " \"N_Geno\": {\"type\": \"number\"},\n", + " \"MAF\": {\"type\": \"string\"},\n", + " },\n", + " \"required\": [\"FID\", \"TID\", \"MAF\"]\n", + "}" + ] + }, + { + "cell_type": "code", + "execution_count": 31, + "id": "6f3beb1e", + "metadata": {}, + "outputs": [], + "source": [ + "jsonschema.Draft7Validator.check_schema(schema)" + ] + }, + { + "cell_type": "code", + "execution_count": 60, + "id": "ffa78f94", + "metadata": {}, + "outputs": [ + { + "data": { + "text/html": [ + "
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FID (string)IID (string)Miss_Pheno (boolean)N_Miss (int)N_GENO (int)MAF (float)
0P554P554N4096977220.02191
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7P572P572N4199977220.02096
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16P594P594N4056977220.02923
17P597P597N4163977220.02501
18P598P598N4356977220.02840
19P602P602N4037977220.02152
\n", + "
" + ], + "text/plain": [ + " FID (string) IID (string) Miss_Pheno (boolean) N_Miss (int) N_GENO (int) \\\n", + "0 P554 P554 N 4096 97722 \n", + "1 P557 P557 N 4011 97722 \n", + "2 P558 P558 N 4327 97722 \n", + "3 P562 P562 N 4099 97722 \n", + "4 P564 P564 N 4100 97722 \n", + "5 P567 P567 N 4013 97722 \n", + "6 P568 P568 Y 4227 97722 \n", + "7 P572 P572 N 4199 97722 \n", + "8 P574 P574 N 4034 97722 \n", + "9 P577 P577 N 4245 97722 \n", + "10 P578 P578 N 4127 97722 \n", + "11 P582 P582 N 4091 97722 \n", + "12 P584 P584 Y 4024 97722 \n", + "13 P587 P587 Y 4123 97722 \n", + "14 P588 P588 N 4330 97722 \n", + "15 P592 P592 N 4013 97722 \n", + "16 P594 P594 N 4056 97722 \n", + "17 P597 P597 N 4163 97722 \n", + "18 P598 P598 N 4356 97722 \n", + "19 P602 P602 N 4037 97722 \n", + "\n", + " MAF (float) \n", + "0 0.02191 \n", + "1 0.02105 \n", + "2 0.02428 \n", + "3 0.02195 \n", + "4 0.02391 \n", + "5 0.02705 \n", + "6 0.02478 \n", + "7 0.02096 \n", + "8 0.02783 \n", + "9 0.02209 \n", + "10 0.02109 \n", + "11 0.02164 \n", + "12 0.02309 \n", + "13 0.02037 \n", + "14 0.02023 \n", + "15 0.02283 \n", + "16 0.02923 \n", + "17 0.02501 \n", + "18 0.02840 \n", + "19 0.02152 " + ] + }, + "execution_count": 60, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "data" + ] + }, + { + "cell_type": "code", + "execution_count": 65, + "id": "4f051a82", + "metadata": {}, + "outputs": [ + { + "data": { + "text/plain": [ + 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+ ] + }, + "execution_count": 65, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "data.reset_index().to_json(orient='records')" + ] + }, + { + "cell_type": "code", + "execution_count": 66, + "id": "19216468", + "metadata": {}, + "outputs": [], + "source": [ + "import json" + ] + }, + { + "cell_type": "code", + "execution_count": 70, + "id": "f13934e6", + "metadata": {}, + "outputs": [], + "source": [ + "f = open('alumni_salary.json')\n", + "jsondata = json.load(f)\n", + "f.close()" + ] + }, + { + "cell_type": "code", + "execution_count": 77, + "id": "e76f2189", + "metadata": {}, + "outputs": [], + "source": [ + "schema = {\n", + " \"type\": \"object\",\n", + " \"properties\": {\n", + " \"name\": {\"type\": \"string\"},\n", + " \"gpa\": {\"type\": \"number\"},\n", + " \"age\": {\"type\": \"number\"},\n", + " \"salary\": {\"type\": \"number\"},\n", + " },\n", + "}" + ] + }, + { + "cell_type": "code", + "execution_count": 78, + "id": "f6544710", + "metadata": {}, + "outputs": [ + { + "ename": "ValidationError", + "evalue": "[{'name': 'John Smith', 'gpa': 3.5, 'age': 25, 'salary': 50000}, {'name': 'Jane Doe', 'gpa': 3.2, 'age': 22, 'salary': 45000}, {'name': 'Bob Johnson', 'gpa': 3.8, 'age': 30, 'salary': 55000}, {'name': 'Sara Lee', 'gpa': 3.0, 'age': 27, 'salary': 40000}, {'name': 'Tom Brown', 'gpa': 3.7, 'age': 32, 'salary': 60000}, {'name': 'Emily Davis', 'gpa': 3.4, 'age': 23, 'salary': 42000}, {'name': 'Michael Miller', 'gpa': 3.9, 'age': 28, 'salary': 65000}, {'name': 'Jessica Wilson', 'gpa': 3.1, 'age': 24, 'salary': 46000}, {'name': 'Matthew Anderson', 'gpa': 3.6, 'age': 29, 'salary': 58000}, {'name': 'Nicholas Thompson', 'gpa': 3.3, 'age': 26, 'salary': 49000}, {'name': 'Ashley Moore', 'gpa': 3.8, 'age': 35, 'salary': 62000}, {'name': 'David Taylor', 'gpa': 3.0, 'age': 31, 'salary': 52000}, {'name': 'Joseph Hernandez', 'gpa': 3.7, 'age': 33, 'salary': 57000}, {'name': 'Brian Martinez', 'gpa': 3.4, 'age': 30, 'salary': 50000}, {'name': 'Brandon Lee', 'gpa': 3.9, 'age': 25, 'salary': 60000}, {'name': 'Adam Clark', 'gpa': 3.1, 'age': 22, 'salary': 45000}, {'name': 'Natalie Rodriguez', 'gpa': 3.6, 'age': 27, 'salary': 48000}, {'name': 'Justin Green', 'gpa': 3.3, 'age': 32, 'salary': 55000}] is not of type 'object'\n\nFailed validating 'type' in schema:\n {'properties': {'age': {'type': 'number'},\n 'gpa': {'type': 'number'},\n 'name': {'type': 'string'},\n 'salary': {'type': 'number'}},\n 'type': 'object'}\n\nOn instance:\n [{'age': 25, 'gpa': 3.5, 'name': 'John Smith', 'salary': 50000},\n {'age': 22, 'gpa': 3.2, 'name': 'Jane Doe', 'salary': 45000},\n {'age': 30, 'gpa': 3.8, 'name': 'Bob Johnson', 'salary': 55000},\n {'age': 27, 'gpa': 3.0, 'name': 'Sara Lee', 'salary': 40000},\n {'age': 32, 'gpa': 3.7, 'name': 'Tom Brown', 'salary': 60000},\n {'age': 23, 'gpa': 3.4, 'name': 'Emily Davis', 'salary': 42000},\n {'age': 28, 'gpa': 3.9, 'name': 'Michael Miller', 'salary': 65000},\n {'age': 24, 'gpa': 3.1, 'name': 'Jessica Wilson', 'salary': 46000},\n {'age': 29, 'gpa': 3.6, 'name': 'Matthew Anderson', 'salary': 58000},\n {'age': 26, 'gpa': 3.3, 'name': 'Nicholas Thompson', 'salary': 49000},\n {'age': 35, 'gpa': 3.8, 'name': 'Ashley Moore', 'salary': 62000},\n {'age': 31, 'gpa': 3.0, 'name': 'David Taylor', 'salary': 52000},\n {'age': 33, 'gpa': 3.7, 'name': 'Joseph Hernandez', 'salary': 57000},\n {'age': 30, 'gpa': 3.4, 'name': 'Brian Martinez', 'salary': 50000},\n {'age': 25, 'gpa': 3.9, 'name': 'Brandon Lee', 'salary': 60000},\n {'age': 22, 'gpa': 3.1, 'name': 'Adam Clark', 'salary': 45000},\n {'age': 27, 'gpa': 3.6, 'name': 'Natalie Rodriguez', 'salary': 48000},\n {'age': 32, 'gpa': 3.3, 'name': 'Justin Green', 'salary': 55000}]", + "output_type": "error", + "traceback": [ + "\u001b[0;31m---------------------------------------------------------------------------\u001b[0m", + "\u001b[0;31mValidationError\u001b[0m Traceback (most recent call last)", + "Cell \u001b[0;32mIn[78], line 1\u001b[0m\n\u001b[0;32m----> 1\u001b[0m \u001b[43mvalidate\u001b[49m\u001b[43m(\u001b[49m\u001b[43mjsondata\u001b[49m\u001b[43m,\u001b[49m\u001b[43m \u001b[49m\u001b[43mschema\u001b[49m\u001b[38;5;241;43m=\u001b[39;49m\u001b[43mschema\u001b[49m\u001b[43m)\u001b[49m\n", + "File \u001b[0;32m/opt/homebrew/lib/python3.10/site-packages/jsonschema/validators.py:1121\u001b[0m, in \u001b[0;36mvalidate\u001b[0;34m(instance, schema, cls, *args, **kwargs)\u001b[0m\n\u001b[1;32m 1119\u001b[0m error \u001b[38;5;241m=\u001b[39m exceptions\u001b[38;5;241m.\u001b[39mbest_match(validator\u001b[38;5;241m.\u001b[39miter_errors(instance))\n\u001b[1;32m 1120\u001b[0m \u001b[38;5;28;01mif\u001b[39;00m error \u001b[38;5;129;01mis\u001b[39;00m \u001b[38;5;129;01mnot\u001b[39;00m \u001b[38;5;28;01mNone\u001b[39;00m:\n\u001b[0;32m-> 1121\u001b[0m \u001b[38;5;28;01mraise\u001b[39;00m error\n", + "\u001b[0;31mValidationError\u001b[0m: [{'name': 'John Smith', 'gpa': 3.5, 'age': 25, 'salary': 50000}, {'name': 'Jane Doe', 'gpa': 3.2, 'age': 22, 'salary': 45000}, {'name': 'Bob Johnson', 'gpa': 3.8, 'age': 30, 'salary': 55000}, {'name': 'Sara Lee', 'gpa': 3.0, 'age': 27, 'salary': 40000}, {'name': 'Tom Brown', 'gpa': 3.7, 'age': 32, 'salary': 60000}, {'name': 'Emily Davis', 'gpa': 3.4, 'age': 23, 'salary': 42000}, {'name': 'Michael Miller', 'gpa': 3.9, 'age': 28, 'salary': 65000}, {'name': 'Jessica Wilson', 'gpa': 3.1, 'age': 24, 'salary': 46000}, {'name': 'Matthew Anderson', 'gpa': 3.6, 'age': 29, 'salary': 58000}, {'name': 'Nicholas Thompson', 'gpa': 3.3, 'age': 26, 'salary': 49000}, {'name': 'Ashley Moore', 'gpa': 3.8, 'age': 35, 'salary': 62000}, {'name': 'David Taylor', 'gpa': 3.0, 'age': 31, 'salary': 52000}, {'name': 'Joseph Hernandez', 'gpa': 3.7, 'age': 33, 'salary': 57000}, {'name': 'Brian Martinez', 'gpa': 3.4, 'age': 30, 'salary': 50000}, {'name': 'Brandon Lee', 'gpa': 3.9, 'age': 25, 'salary': 60000}, {'name': 'Adam Clark', 'gpa': 3.1, 'age': 22, 'salary': 45000}, {'name': 'Natalie Rodriguez', 'gpa': 3.6, 'age': 27, 'salary': 48000}, {'name': 'Justin Green', 'gpa': 3.3, 'age': 32, 'salary': 55000}] is not of type 'object'\n\nFailed validating 'type' in schema:\n {'properties': {'age': {'type': 'number'},\n 'gpa': {'type': 'number'},\n 'name': {'type': 'string'},\n 'salary': {'type': 'number'}},\n 'type': 'object'}\n\nOn instance:\n [{'age': 25, 'gpa': 3.5, 'name': 'John Smith', 'salary': 50000},\n {'age': 22, 'gpa': 3.2, 'name': 'Jane Doe', 'salary': 45000},\n {'age': 30, 'gpa': 3.8, 'name': 'Bob Johnson', 'salary': 55000},\n {'age': 27, 'gpa': 3.0, 'name': 'Sara Lee', 'salary': 40000},\n {'age': 32, 'gpa': 3.7, 'name': 'Tom Brown', 'salary': 60000},\n {'age': 23, 'gpa': 3.4, 'name': 'Emily Davis', 'salary': 42000},\n {'age': 28, 'gpa': 3.9, 'name': 'Michael Miller', 'salary': 65000},\n {'age': 24, 'gpa': 3.1, 'name': 'Jessica Wilson', 'salary': 46000},\n {'age': 29, 'gpa': 3.6, 'name': 'Matthew Anderson', 'salary': 58000},\n {'age': 26, 'gpa': 3.3, 'name': 'Nicholas Thompson', 'salary': 49000},\n {'age': 35, 'gpa': 3.8, 'name': 'Ashley Moore', 'salary': 62000},\n {'age': 31, 'gpa': 3.0, 'name': 'David Taylor', 'salary': 52000},\n {'age': 33, 'gpa': 3.7, 'name': 'Joseph Hernandez', 'salary': 57000},\n {'age': 30, 'gpa': 3.4, 'name': 'Brian Martinez', 'salary': 50000},\n {'age': 25, 'gpa': 3.9, 'name': 'Brandon Lee', 'salary': 60000},\n {'age': 22, 'gpa': 3.1, 'name': 'Adam Clark', 'salary': 45000},\n {'age': 27, 'gpa': 3.6, 'name': 'Natalie Rodriguez', 'salary': 48000},\n {'age': 32, 'gpa': 3.3, 'name': 'Justin Green', 'salary': 55000}]" + ] + } + ], + "source": [ + "validate(jsondata, schema=schema)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "5dc8972f", + "metadata": {}, + "outputs": [], + "source": [] + }, + { + "cell_type": "code", + "execution_count": 23, + "id": "eedebe10", + "metadata": {}, + "outputs": [], + "source": [ + "validate(\"127.0.0.1\", {\"format\" : \"ipv4\"}, format_checker=jsonschema.Draft202012Validator.FORMAT_CHECKER)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "id": "d56d0083", + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.10.9" + } + }, + "nbformat": 4, + "nbformat_minor": 5 +} diff --git a/backend-services/schema_files/patient_genotype.json b/backend-services/schema_files/patient_genotype.json new file mode 100644 index 0000000..90da073 --- /dev/null +++ b/backend-services/schema_files/patient_genotype.json @@ -0,0 +1,182 @@ +[ + { + "index": 0, + "FID": "P554", + "IID": "P554", + "Miss_Pheno": "N", + "N_Miss": 4096, + "N_Geno": 97722, + "MAF": 0.02191 + }, + { + "index": 1, + "FID": "P557", + "IID": "P557", + "Miss_Pheno": "N", + "N_Miss": 4011, + "N_Geno": 97722, + "MAF": 0.02105 + }, + { + "index": 2, + "FID": "P558", + "IID": "P558", + "Miss_Pheno": "N", + "N_Miss": 4327, + "N_Geno": 97722, + "MAF": 0.02428 + }, + { + "index": 3, + "FID": "P562", + "IID": "P562", + "Miss_Pheno": "N", + "N_Miss": 4099, + "N_Geno": 97722, + "MAF": 0.02195 + }, + { + "index": 4, + "FID": "P564", + "IID": "P564", + "Miss_Pheno": "N", + "N_Miss": 4100, + "N_Geno": 97722, + "MAF": 0.02391 + }, + { + "index": 5, + "FID": "P567", + "IID": "P567", + "Miss_Pheno": "N", + "N_Miss": 4013, + "N_Geno": 97722, + "MAF": 0.02705 + }, + { + "index": 6, + "FID": "P568", + "IID": "P568", + "Miss_Pheno": "Y", + "N_Miss": 4227, + "N_Geno": 97722, + "MAF": 0.02478 + }, + { + "index": 7, + "FID": "P572", + "IID": "P572", + "Miss_Pheno": "N", + "N_Miss": 4199, + "N_Geno": 97722, + "MAF": 0.02096 + }, + { + "index": 8, + "FID": "P574", + "IID": "P574", + "Miss_Pheno": "N", + "N_Miss": 4034, + "N_Geno": 97722, + "MAF": 0.02783 + }, + { + "index": 9, + "FID": "P577", + "IID": "P577", + "Miss_Pheno": "N", + "N_Miss": 4245, + "N_Geno": 97722, + "MAF": 0.02209 + }, + { + "index": 10, + "FID": "P578", + "IID": "P578", + "Miss_Pheno": "N", + "N_Miss": 4127, + "N_Geno": 97722, + "MAF": 0.02109 + }, + { + "index": 11, + "FID": "P582", + "IID": "P582", + "Miss_Pheno": "N", + "N_Miss": 4091, + "N_Geno": 97722, + "MAF": 0.02164 + }, + { + "index": 12, + "FID": "P584", + "IID": "P584", + "Miss_Pheno": "Y", + "N_Miss": 4024, + "N_Geno": 97722, + "MAF": 0.02309 + }, + { + "index": 13, + "FID": "P587", + "IID": "P587", + "Miss_Pheno": "Y", + "N_Miss": 4123, + "N_Geno": 97722, + "MAF": 0.02037 + }, + { + "index": 14, + "FID": "P588", + "IID": "P588", + "Miss_Pheno": "N", + "N_Miss": 4330, + "N_Geno": 97722, + "MAF": 0.02023 + }, + { + "index": 15, + "FID": "P592", + "IID": "P592", + "Miss_Pheno": "N", + "N_Miss": 4013, + "N_Geno": 97722, + "MAF": 0.02283 + }, + { + "index": 16, + "FID": "P594", + "IID": "P594", + "Miss_Pheno": "N", + "N_Miss": 4056, + "N_Geno": 97722, + "MAF": 0.02923 + }, + { + "index": 17, + "FID": "P597", + "IID": "P597", + "Miss_Pheno": "N", + "N_Miss": 4163, + "N_Geno": 97722, + "MAF": 0.02501 + }, + { + "index": 18, + "FID": "P598", + "IID": "P598", + "Miss_Pheno": "N", + "N_Miss": 4356, + "N_Geno": 97722, + "MAF": 0.0284 + }, + { + "index": 19, + "FID": "P602", + "IID": "P602", + "Miss_Pheno": "N", + "N_Miss": 4037, + "N_Geno": 97722, + "MAF": 0.02152 + } +] \ No newline at end of file diff --git a/backend-services/schema_files/patient_genotype.tsv b/backend-services/schema_files/patient_genotype.tsv new file mode 100644 index 0000000..4d600f3 --- /dev/null +++ b/backend-services/schema_files/patient_genotype.tsv @@ -0,0 +1,21 @@ +FID IID Miss_Pheno N_Miss N_Geno MAF +P554 P554 N 4096 97722 0.02191 +P557 P557 N 4011 97722 0.02105 +P558 P558 N 4327 97722 0.02428 +P562 P562 N 4099 97722 0.02195 +P564 P564 N 4100 97722 0.02391 +P567 P567 N 4013 97722 0.02705 +P568 P568 Y 4227 97722 0.02478 +P572 P572 N 4199 97722 0.02096 +P574 P574 N 4034 97722 0.02783 +P577 P577 N 4245 97722 0.02209 +P578 P578 N 4127 97722 0.02109 +P582 P582 N 4091 97722 0.02164 +P584 P584 Y 4024 97722 0.02309 +P587 P587 Y 4123 97722 0.02037 +P588 P588 N 4330 97722 0.02023 +P592 P592 N 4013 97722 0.02283 +P594 P594 N 4056 97722 0.02923 +P597 P597 N 4163 97722 0.02501 +P598 P598 N 4356 97722 0.02840 +P602 P602 N 4037 97722 0.02152 \ No newline at end of file diff --git a/backend-services/schema_files/patient_genotype_schema.json b/backend-services/schema_files/patient_genotype_schema.json new file mode 100644 index 0000000..b18b677 --- /dev/null +++ b/backend-services/schema_files/patient_genotype_schema.json @@ -0,0 +1,12 @@ +schema = { + "type": "object", + "properties": { + "FID": {"type": "number"}, + "IID": {"type": "string"}, + "Miss_Pheno": {"type": "number"}, + "N_Miss": {"type": "number"}, + "N_Geno": {"type": "number"}, + "MAF": {"type": "string"}, + }, + "required": ["FID", "TID", "MAF"] +} \ No newline at end of file diff --git a/backend-services/src/common/__init__.py b/backend-services/src/common/__init__.py new file mode 100644 index 0000000..4e2423d --- /dev/null +++ b/backend-services/src/common/__init__.py @@ -0,0 +1,4 @@ +""" +A collection of various helpers, convenience libraries or otherwise commonly +reused code for the Nautilus Vault backend. +""" diff --git a/backend-services/src/common/__pycache__/__init__.cpython-311.pyc b/backend-services/src/common/__pycache__/__init__.cpython-311.pyc new file mode 100644 index 0000000..0fdfc2c Binary files /dev/null and b/backend-services/src/common/__pycache__/__init__.cpython-311.pyc differ diff --git a/backend-services/src/common/__pycache__/settings.cpython-311.pyc b/backend-services/src/common/__pycache__/settings.cpython-311.pyc new file mode 100644 index 0000000..964d6c7 Binary files /dev/null and b/backend-services/src/common/__pycache__/settings.cpython-311.pyc differ diff --git a/backend-services/src/common/__pycache__/types.cpython-311.pyc b/backend-services/src/common/__pycache__/types.cpython-311.pyc new file mode 100644 index 0000000..fd5e2f6 Binary files /dev/null and b/backend-services/src/common/__pycache__/types.cpython-311.pyc differ diff --git a/backend-services/src/common/settings.py b/backend-services/src/common/settings.py new file mode 100644 index 0000000..9d37d85 --- /dev/null +++ b/backend-services/src/common/settings.py @@ -0,0 +1,27 @@ +from pydantic import BaseSettings +from pydantic.env_settings import SettingsSourceCallable + + +class Settings(BaseSettings): + """ + Application configuration settings. + + Values not passed as keyword arguments are read from the environment if + available. Environment variables override settings passed in. + """ + + class Config: + allow_mutation = False + env_file = ".env" + + @classmethod + def customise_sources( + cls: type, + init_settings: SettingsSourceCallable, + env_settings: SettingsSourceCallable, + file_secret_settings: SettingsSourceCallable, + ) -> tuple[SettingsSourceCallable, ...]: + # Environment variables should take precedence: + # + # https://pydantic-docs.helpmanual.io/usage/settings/#changing-priority + return env_settings, init_settings, file_secret_settings diff --git a/backend-services/src/common/types.py b/backend-services/src/common/types.py new file mode 100644 index 0000000..9de818f --- /dev/null +++ b/backend-services/src/common/types.py @@ -0,0 +1,6 @@ +from typing import NewType + +WalletAddress = NewType("WalletAddress", str) +""" +A type for vault wallet addresses. +""" diff --git a/backend-services/src/data_service/__init__.py b/backend-services/src/data_service/__init__.py new file mode 100644 index 0000000..40c4e6e --- /dev/null +++ b/backend-services/src/data_service/__init__.py @@ -0,0 +1,3 @@ +""" +Data service for the Nautilus Vault backend. +""" diff --git a/backend-services/src/data_service/__pycache__/__init__.cpython-311.pyc b/backend-services/src/data_service/__pycache__/__init__.cpython-311.pyc new file mode 100644 index 0000000..498e8fa Binary files /dev/null and b/backend-services/src/data_service/__pycache__/__init__.cpython-311.pyc differ diff --git a/backend-services/src/data_service/operations/__init__.py b/backend-services/src/data_service/operations/__init__.py new file mode 100644 index 0000000..a80e0ed --- /dev/null +++ b/backend-services/src/data_service/operations/__init__.py @@ -0,0 +1,3 @@ +""" +The collection of database operations provided by the data service. +""" diff --git a/backend-services/src/data_service/operations/__pycache__/__init__.cpython-311.pyc b/backend-services/src/data_service/operations/__pycache__/__init__.cpython-311.pyc new file mode 100644 index 0000000..e158bd6 Binary files /dev/null and b/backend-services/src/data_service/operations/__pycache__/__init__.cpython-311.pyc differ diff --git a/backend-services/src/data_service/operations/__pycache__/datapool.cpython-311.pyc b/backend-services/src/data_service/operations/__pycache__/datapool.cpython-311.pyc new file mode 100644 index 0000000..2bb5557 Binary files /dev/null and b/backend-services/src/data_service/operations/__pycache__/datapool.cpython-311.pyc differ diff --git a/backend-services/src/data_service/operations/__pycache__/dataset.cpython-311.pyc b/backend-services/src/data_service/operations/__pycache__/dataset.cpython-311.pyc new file mode 100644 index 0000000..3707d5c Binary files /dev/null and b/backend-services/src/data_service/operations/__pycache__/dataset.cpython-311.pyc differ diff --git a/backend-services/src/data_service/operations/datapool.py b/backend-services/src/data_service/operations/datapool.py new file mode 100644 index 0000000..6f7f27e --- /dev/null +++ b/backend-services/src/data_service/operations/datapool.py @@ -0,0 +1,45 @@ +from fastapi import HTTPException +from odmantic import ObjectId + +from common.types import WalletAddress +from data_service.schema.actions import CreateDatapool, DeleteDatapool +from data_service.schema.entities import Datapool, DatapoolList +from data_service.schema.types import Engine + + +async def create_datapool(engine: Engine, params: CreateDatapool) -> Datapool: + """ + Create a new datapool. + """ + new_datapool = Datapool( + creator_wallet_id=params.creator_wallet_id, + name=params.name, + description=params.description, + datapool_hash=params.datapool_hash, + smart_contract_id=params.smart_contract_id, + smart_contract_address=params.smart_contract_address, + sealed_data=params.sealed_data, + total_rows=params.total_rows, + created=params.created + ) + await engine.save(new_datapool) + return new_datapool + + +async def delete_datapool(engine: Engine, params: DeleteDatapool) -> None: + """ + Delete a specified datapool. + """ + # XXX: assumes `params.id` is a 24 character hex string + id_to_delete = ObjectId(params.delete_id) + existing_datapool = await engine.find_one(Datapool, Datapool.id == id_to_delete) + if existing_datapool is None: + raise HTTPException(404) + await engine.delete(existing_datapool) + + +async def datapools(engine: Engine, wallet_id: WalletAddress) -> DatapoolList: + """ + Retrieve a list of all datapools for a given user from the database. + """ + return await engine.find(Datapool, Datapool.wallet_id == wallet_id) diff --git a/backend-services/src/data_service/operations/dataschema.py b/backend-services/src/data_service/operations/dataschema.py new file mode 100644 index 0000000..1754a39 --- /dev/null +++ b/backend-services/src/data_service/operations/dataschema.py @@ -0,0 +1,39 @@ +from fastapi import HTTPException +from odmantic import ObjectId + +from common.types import WalletAddress +from data_service.schema.actions import CreateDataschema, DeleteDataschema +from data_service.schema.entities import Dataschema +from data_service.schema.types import Engine + + +async def create_dataschema(engine: Engine, params: CreateDataschema) -> Dataschema: + """ + Create a new dataschema. + """ + new_dataschema = Dataschema( + name=params.name, + data_schema=params.data_schema, + created=params.created + ) + await engine.save(new_dataschema) + return new_dataschema + + +async def delete_dataschema(engine: Engine, params: DeleteDataschema) -> None: + """ + Delete a specified dataschema. + """ + # XXX: assumes `params.id` is a 24 character hex string + id_to_delete = ObjectId(params.delete_id) + existing_dataschema = await engine.find_one(Dataschema, Dataschema.id == id_to_delete) + if existing_dataschema is None: + raise HTTPException(404) + await engine.delete(existing_dataschema) + + +async def find_by_pool(engine: Engine, data_schema_id: str) -> DataschemaList: + """ + Retrieve a list of all dataschemas for a given user from the database. + """ + return await engine.find(Dataschema, Dataschema.data_schema_id == data_schema_id) diff --git a/backend-services/src/data_service/operations/dataset.py b/backend-services/src/data_service/operations/dataset.py new file mode 100644 index 0000000..eadf7fd --- /dev/null +++ b/backend-services/src/data_service/operations/dataset.py @@ -0,0 +1,51 @@ +from fastapi import HTTPException +from odmantic import ObjectId + +from common.types import WalletAddress +from data_service.schema.actions import CreateDataset, DeleteDataset +from data_service.schema.entities import Dataset, DatasetList +from data_service.schema.types import Engine + + +async def create_dataset(engine: Engine, params: CreateDataset) -> Dataset: + """ + Create a new dataset. + """ + new_dataset = Dataset( + wallet_id=params.wallet_id, + data_pool_id=params.data_pool_id, + data_schema_id=params.data_schema_id, + name=params.name, + description=params.description, + num_of_rows=params.num_of_rows, + data_pool_position=params.data_pool_position, + created=params.created, + ) + await engine.save(new_dataset) + return new_dataset + + +async def delete_dataset(engine: Engine, params: DeleteDataset) -> None: + """ + Delete a specified dataset. + """ + # XXX: assumes `params.id` is a 24 character hex string + id_to_delete = ObjectId(params.delete_id) + existing_dataset = await engine.find_one(Dataset, Dataset.id == id_to_delete) + if existing_dataset is None: + raise HTTPException(404) + await engine.delete(existing_dataset) + + +async def datasets(engine: Engine, wallet_id: WalletAddress) -> DatasetList: + """ + Retrieve a list of all datasets for a given user from the database. + """ + return await engine.find(Dataset, Dataset.wallet_id == wallet_id) + + +async def find_by_pool(engine: Engine, data_pool_id: str) -> DatasetList: + """ + Retrieve a list of all datasets for a given user from the database. + """ + return await engine.find(Dataset, Dataset.data_pool_id == data_pool_id) diff --git a/backend-services/src/data_service/schema/__init__.py b/backend-services/src/data_service/schema/__init__.py new file mode 100644 index 0000000..58bc07d --- /dev/null +++ b/backend-services/src/data_service/schema/__init__.py @@ -0,0 +1,3 @@ +""" +Internals and abstractions for the data service. +""" diff --git a/backend-services/src/data_service/schema/__pycache__/__init__.cpython-311.pyc b/backend-services/src/data_service/schema/__pycache__/__init__.cpython-311.pyc new file mode 100644 index 0000000..cccd3fb Binary files /dev/null and b/backend-services/src/data_service/schema/__pycache__/__init__.cpython-311.pyc differ diff --git a/backend-services/src/data_service/schema/__pycache__/actions.cpython-311.pyc b/backend-services/src/data_service/schema/__pycache__/actions.cpython-311.pyc new file mode 100644 index 0000000..ec52f85 Binary files /dev/null and b/backend-services/src/data_service/schema/__pycache__/actions.cpython-311.pyc differ diff --git a/backend-services/src/data_service/schema/__pycache__/entities.cpython-311.pyc b/backend-services/src/data_service/schema/__pycache__/entities.cpython-311.pyc new file mode 100644 index 0000000..4badd78 Binary files /dev/null and b/backend-services/src/data_service/schema/__pycache__/entities.cpython-311.pyc differ diff --git a/backend-services/src/data_service/schema/__pycache__/types.cpython-311.pyc b/backend-services/src/data_service/schema/__pycache__/types.cpython-311.pyc new file mode 100644 index 0000000..55ed99d Binary files /dev/null and b/backend-services/src/data_service/schema/__pycache__/types.cpython-311.pyc differ diff --git a/backend-services/src/data_service/schema/actions.py b/backend-services/src/data_service/schema/actions.py new file mode 100644 index 0000000..fa99c7a --- /dev/null +++ b/backend-services/src/data_service/schema/actions.py @@ -0,0 +1,99 @@ +from pydantic import BaseModel, validator + +from common.types import WalletAddress +from datetime import datetime + + +class CreateDataset(BaseModel): + """ + Datset creation parameters. + """ + + wallet_id: WalletAddress + data_pool_id: str + data_schema_id: str + name: str + description: str + num_of_rows: int + data_pool_position: int + created: datetime + + +class DeleteDataset(BaseModel): + """ + Dataset deletion parameters. + """ + + delete_id: str + + @validator("delete_id") + @classmethod + def valid_object_id_hex_representation(cls: type, v: str) -> str: + int(v, 16) + if len(v) != 24: + raise AssertionError( + f"expected a 24 character hexadecimal string but '{v}' has length {len(v)}" + ) + return v + + +class CreateDatapool(BaseModel): + """ + Datpool creation parameters. + """ + + creator_wallet_id: WalletAddress + name: str + description: str + datapool_hash: str + smart_contract_id: str + smart_contract_address: str + sealed_data: str + total_rows: int + created: datetime + + +class DeleteDatapool(BaseModel): + """ + Datapool deletion parameters. + """ + + delete_id: str + + @validator("delete_id") + @classmethod + def valid_object_id_hex_representation(cls: type, v: str) -> str: + int(v, 16) + if len(v) != 24: + raise AssertionError( + f"expected a 24 character hexadecimal string but '{v}' has length {len(v)}" + ) + return v + + +class CreateDataschema(BaseModel): + """ + Schema creation parameters. + """ + + name: str + data_schema: str + created: datetime + + +class DeleteDataschema(BaseModel): + """ + Datapool deletion parameters. + """ + + delete_id: str + + @validator("delete_id") + @classmethod + def valid_object_id_hex_representation(cls: type, v: str) -> str: + int(v, 16) + if len(v) != 24: + raise AssertionError( + f"expected a 24 character hexadecimal string but '{v}' has length {len(v)}" + ) + return v diff --git a/backend-services/src/data_service/schema/entities.py b/backend-services/src/data_service/schema/entities.py new file mode 100644 index 0000000..aeebe5c --- /dev/null +++ b/backend-services/src/data_service/schema/entities.py @@ -0,0 +1,54 @@ +from typing import TypeAlias + +from odmantic import Model + +from common.types import WalletAddress + +from datetime import datetime + + +class Dataset(Model): + """ + An address on the ledger dataseted by the user. + """ + + wallet_id: WalletAddress + data_pool_id: str + data_schema_id: str + name: str + description: str + num_of_rows: int + data_pool_position: int + created: datetime + + +DatasetList: TypeAlias = list[Dataset] + + +class Datapool(Model): + """ + An address on the ledger dataseted by the user. + """ + + creator_wallet_id: WalletAddress + name: str + description: str + datapool_hash: str + smart_contract_id: str + smart_contract_address: str + sealed_data: str + total_rows: int + created: datetime + + +DatapoolList: TypeAlias = list[Datapool] + + +class Dataschema(Model): + """ + A JSON schema for a dataset of datapool. + """ + + name: str + data_schema: str + created: datetime diff --git a/backend-services/src/data_service/schema/types.py b/backend-services/src/data_service/schema/types.py new file mode 100644 index 0000000..919c327 --- /dev/null +++ b/backend-services/src/data_service/schema/types.py @@ -0,0 +1,8 @@ +from typing import TypeAlias + +from odmantic import AIOEngine + +""" +A database engine instance. +""" +Engine: TypeAlias = AIOEngine diff --git a/backend-services/src/web_asgi/__init__.py b/backend-services/src/web_asgi/__init__.py new file mode 100644 index 0000000..332be91 --- /dev/null +++ b/backend-services/src/web_asgi/__init__.py @@ -0,0 +1,4 @@ +""" +The web server and its endpoints that exposes the various services of Vault +backend. +""" diff --git a/backend-services/src/web_asgi/__pycache__/__init__.cpython-311.pyc b/backend-services/src/web_asgi/__pycache__/__init__.cpython-311.pyc new file mode 100644 index 0000000..bcf4adb Binary files /dev/null and b/backend-services/src/web_asgi/__pycache__/__init__.cpython-311.pyc differ diff --git a/backend-services/src/web_asgi/__pycache__/main.cpython-311.pyc b/backend-services/src/web_asgi/__pycache__/main.cpython-311.pyc new file mode 100644 index 0000000..953d68d Binary files /dev/null and b/backend-services/src/web_asgi/__pycache__/main.cpython-311.pyc differ diff --git a/backend-services/src/web_asgi/__pycache__/settings.cpython-311.pyc b/backend-services/src/web_asgi/__pycache__/settings.cpython-311.pyc new file mode 100644 index 0000000..f042824 Binary files /dev/null and b/backend-services/src/web_asgi/__pycache__/settings.cpython-311.pyc differ diff --git a/backend-services/src/web_asgi/main.py b/backend-services/src/web_asgi/main.py new file mode 100644 index 0000000..4bbfe3e --- /dev/null +++ b/backend-services/src/web_asgi/main.py @@ -0,0 +1,87 @@ +""" +Entry point for the Nautilus Wallet web server. +""" + +from fastapi import FastAPI, status +from fastapi.middleware.cors import CORSMiddleware +from motor.motor_asyncio import AsyncIOMotorClient +from odmantic import AIOEngine + +from common.types import WalletAddress +from data_service.operations.dataset import datasets, create_dataset +from data_service.operations.dataset import delete_dataset as data_delete_dataset +from data_service.schema.actions import CreateDataset, DeleteDataset, CreateDatapool, DeleteDatapool, CreateDataschema +from data_service.schema.entities import Dataset, DatasetList, Datapool, DatapoolList, Dataschema + +from data_service.operations.datapool import datapools, create_datapool, delete_datapool + +from web_asgi.settings import AppSettings + +app_settings = AppSettings() +mongo_client = AsyncIOMotorClient(app_settings.vault_db_connection_string) +mongo_engine = AIOEngine( + client=mongo_client, + database=app_settings.vault_db_name, +) + +origins = [str(app_settings.primary_origin)] +if app_settings.staging_mode: + origins.append("http://localhost:4200") + +app = FastAPI() +app.add_middleware( + CORSMiddleware, + allow_origins=origins, + allow_credentials=True, + allow_methods=["GET", "POST", "HEAD", "DELETE"], + allow_headers=["*"], +) + + +@app.get("/datasets", response_model=DatasetList, status_code=status.HTTP_200_OK) +async def get_datasets(wallet_id: WalletAddress) -> DatasetList: + return await datasets(mongo_engine, wallet_id) + + +@app.post( + "/dataset/create", response_model=Dataset, status_code=status.HTTP_201_CREATED +) +async def post_dataset_create(request: CreateDataset) -> Dataset: + return await create_dataset(mongo_engine, request) + + +@app.delete( + "/dataset", + response_model=None, + status_code=status.HTTP_204_NO_CONTENT, +) +async def delete_dataset(request: DeleteDataset) -> None: + await data_delete_dataset(mongo_engine, request) + + +@app.get("/datapools", response_model=DatapoolList, status_code=status.HTTP_200_OK) +async def get_datapools(wallet_id: WalletAddress) -> DatapoolList: + return await datapools(mongo_engine, wallet_id) + + +@app.post( + "/datapool/create", response_model=Datapool, status_code=status.HTTP_201_CREATED +) +async def post_datapool_create(request: CreateDatapool) -> Datapool: + return await create_datapool(mongo_engine, request) + + +@app.delete( + "/datapool", + response_model=None, + status_code=status.HTTP_204_NO_CONTENT, +) +async def post_delete_datapool(request: DeleteDatapool) -> None: + await delete_datapool(mongo_engine, request) + + +@app.post( + "/dataschema/create", response_model=Dataschema, status_code=status.HTTP_201_CREATED +) +async def post_dataschema_create(request: CreateDataschema) -> Dataschema: + return await create_dataschema(mongo_engine, request) diff --git a/backend-services/src/web_asgi/settings.py b/backend-services/src/web_asgi/settings.py new file mode 100644 index 0000000..724737e --- /dev/null +++ b/backend-services/src/web_asgi/settings.py @@ -0,0 +1,14 @@ +from pydantic import HttpUrl, MongoDsn + +from common.settings import Settings + + +class AppSettings(Settings): + """ + Application configuration settings + """ + + primary_origin: HttpUrl + staging_mode: bool = False + vault_db_name: str + vault_db_connection_string: MongoDsn diff --git a/backend-services/tests/__init__.py b/backend-services/tests/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/backend-services/tests/data_service/__init__.py b/backend-services/tests/data_service/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/backend-services/tests/data_service/operations/__init__.py b/backend-services/tests/data_service/operations/__init__.py new file mode 100644 index 0000000..e69de29 diff --git a/backend-services/tests/data_service/operations/helpers.py b/backend-services/tests/data_service/operations/helpers.py new file mode 100644 index 0000000..3e09665 --- /dev/null +++ b/backend-services/tests/data_service/operations/helpers.py @@ -0,0 +1,5 @@ +from data_service.settings import MongoSettings + +mock_settings = MongoSettings( + vault_db_dataset_collection="dataset", +) diff --git a/backend-services/tests/data_service/operations/test_bookmark.py b/backend-services/tests/data_service/operations/test_bookmark.py new file mode 100644 index 0000000..ca48154 --- /dev/null +++ b/backend-services/tests/data_service/operations/test_bookmark.py @@ -0,0 +1,84 @@ +from unittest.mock import AsyncMock + +import pytest +from motor import motor_asyncio +from odmantic import AIOEngine, ObjectId +from pytest_mock import MockerFixture + +from common.types import WalletAddress +from data_service.operations.dataset import datasets, create_dataset, delete_dataset +from data_service.schema.actions import CreateDataset, DeleteDataset +from data_service.schema.entities import Dataset + + +@pytest.mark.asyncio +async def test_create_dataset_success(mocker: MockerFixture) -> None: + mocker.patch("motor.motor_asyncio.AsyncIOMotorClient") + test_create_dataset = CreateDataset( + wallet_id=WalletAddress("test_wallet_id"), + name="test_name", + address=WalletAddress("test_address"), + ) + + mock_save = AsyncMock(return_value=test_create_dataset) + mocker.patch.object(AIOEngine, "save", mock_save) + engine = AIOEngine(client=motor_asyncio.AsyncIOMotorClient()) + + returned_dataset = await create_dataset(engine, test_create_dataset) + mock_save.assert_awaited_once_with(returned_dataset) + + +@pytest.mark.asyncio +async def test_delete_dataset_success(mocker: MockerFixture) -> None: + hex_string_id = "a" * 24 + dataset_to_delete = Dataset.parse_obj( + { + "id": ObjectId(hex_string_id), + "wallet_id": "test_wallet_id", + "name": "test_name1", + "address": "test_address1", + } + ) + mocker.patch("motor.motor_asyncio.AsyncIOMotorClient") + + mock_find_one = AsyncMock(return_value=dataset_to_delete) + mock_delete = AsyncMock(return_value=None) + mocker.patch.object(AIOEngine, "find_one", mock_find_one) + mocker.patch.object(AIOEngine, "delete", mock_delete) + + engine = AIOEngine(client=motor_asyncio.AsyncIOMotorClient()) + + params = DeleteDataset(delete_id=hex_string_id) + + assert await delete_dataset(engine, params) is None + mock_find_one.assert_awaited_once_with( + Dataset, Dataset.id == ObjectId(params.delete_id) + ) + mock_delete.assert_awaited_once_with(dataset_to_delete) + + +@pytest.mark.asyncio +async def test_get_datasets_success(mocker: MockerFixture) -> None: + stored_docs = [ + { + "id": ObjectId(b"a" * 12), + "wallet_id": "test_wallet_id", + "name": "test_name1", + "address": "test_address1", + }, + { + "id": ObjectId(b"b" * 12), + "wallet_id": "test_wallet_id", + "name": "test_name2", + "address": "test_address2", + }, + ] + mock_find = AsyncMock(return_value=stored_docs) + mocker.patch("motor.motor_asyncio.AsyncIOMotorClient") + mocker.patch.object(AIOEngine, "find", mock_find) + engine = AIOEngine(client=motor_asyncio.AsyncIOMotorClient()) + + wallet_id = WalletAddress("test_wallet_id") + expected_datasets = [Dataset.parse_obj(doc) for doc in stored_docs] + assert await datasets(engine, wallet_id) == expected_datasets + mock_find.assert_awaited_once_with(Dataset, Dataset.wallet_id == wallet_id) diff --git a/rust-workspace/Cargo.lock b/rust-workspace/Cargo.lock index 00cf752..15fc79e 100644 --- a/rust-workspace/Cargo.lock +++ b/rust-workspace/Cargo.lock @@ -2,6 +2,316 @@ # It is not intended for manual editing. version = 3 +[[package]] +name = "actix-codec" +version = "0.2.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "09e55f0a5c2ca15795035d90c46bd0e73a5123b72f68f12596d6ba5282051380" +dependencies = [ + "bitflags", + "bytes 0.5.6", + "futures-core", + "futures-sink", + "log", + "tokio 0.2.25", + "tokio-util 0.2.0", +] + +[[package]] +name = "actix-codec" +version = "0.3.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "78d1833b3838dbe990df0f1f87baf640cf6146e898166afe401839d1b001e570" +dependencies = [ + "bitflags", + "bytes 0.5.6", + "futures-core", + "futures-sink", + "log", + "pin-project 0.4.30", + "tokio 0.2.25", + "tokio-util 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"futures-util", + "fxhash", + "h2 0.2.7", + "http", + "httparse", + "indexmap", + "language-tags", + "lazy_static", + "log", + "mime", + "percent-encoding", + "pin-project 0.4.30", + "rand 0.7.3", + "regex", + "serde", + "serde_json", + "serde_urlencoded 0.6.1", + "sha1", + "slab", + "time 0.1.43", +] + +[[package]] +name = "actix-macros" +version = "0.1.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b4ca8ce00b267af8ccebbd647de0d61e0674b6e61185cc7a592ff88772bed655" +dependencies = [ + "quote", + "syn", +] + +[[package]] +name = "actix-router" +version = "0.2.7" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "2ad299af73649e1fc893e333ccf86f377751eb95ff875d095131574c6f43452c" +dependencies = [ + "bytestring", + "http", + "log", + "regex", + "serde", +] + +[[package]] +name = "actix-rt" +version = "1.1.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = 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"actix-http", + "actix-macros", + "actix-router", + "actix-rt", + "actix-server", + "actix-service", + "actix-testing", + "actix-threadpool", + "actix-tls", + "actix-utils 1.0.6", + "actix-web-codegen", + "awc", + "bytes 0.5.6", + "derive_more", + "encoding_rs", + "futures", + "fxhash", + "log", + "mime", + "net2", + "pin-project 0.4.30", + "regex", + "serde", + "serde_json", + "serde_urlencoded 0.6.1", + "time 0.1.43", + "url", +] + +[[package]] +name = "actix-web-codegen" +version = "0.2.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "a71bf475cbe07281d0b3696abb48212db118e7e23219f13596ce865235ff5766" +dependencies = [ + "proc-macro2", + "quote", + "syn", +] + +[[package]] +name = "addr2line" +version = "0.17.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b9ecd88a8c8378ca913a680cd98f0f13ac67383d35993f86c90a70e3f137816b" +dependencies = [ + "gimli", +] + +[[package]] +name = "adler" +version = "1.0.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f26201604c87b1e01bd3d98f8d5d9a8fcbb815e8cedb41ffccbeb4bf593a35fe" + [[package]] name = "aead" version = "0.4.3" @@ -17,7 +327,7 @@ version = "0.7.6" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "fcb51a0695d8f838b1ee009b3fbf66bda078cd64590202a864a8f3e8c4315c47" dependencies = [ - "getrandom", + "getrandom 0.2.6", "once_cell", "serde", "version_check", @@ -51,7 +361,7 @@ dependencies = [ "num-bigint 0.4.3", "num-traits", "rmp-serde", - "sha2", + "sha2 0.10.2", "thiserror", ] @@ -66,7 +376,7 @@ dependencies = [ "num-bigint 0.4.3", "regex", "serde", - "sha2", + "sha2 0.10.2", "thiserror", ] @@ -82,7 +392,7 @@ dependencies = [ "async-trait", "data-encoding", "derive_more", - "reqwest", + "reqwest 0.11.10", "serde", "serde_json", "thiserror", @@ -101,7 +411,7 @@ dependencies = [ "ring", "rmp-serde", "serde", - "sha2", + "sha2 0.10.2", "static_assertions", "thiserror", ] @@ -118,7 +428,7 @@ dependencies = [ "lazy_static", "ring", "serde", - "sha2", + "sha2 0.10.2", "static_assertions", "thiserror", ] @@ -159,20 +469,29 @@ dependencies = [ "algonaut_model", "data-encoding", "derive_more", - "getrandom", + "getrandom 0.2.6", "num-bigint 0.4.3", "num-traits", - "rand", + "rand 0.8.5", "ring", "rmp-serde", "serde", "serde_bytes", - "sha2", + "sha2 0.10.2", "thiserror", "url", "urlencoding", ] +[[package]] +name = "android_system_properties" +version = "0.1.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "819e7219dbd41043ac279b19830f2efc897156490d7fd6ea916720117ee66311" +dependencies = [ + "libc", +] + [[package]] name = "anyhow" version = "1.0.57" @@ -212,7 +531,7 @@ checksum = "d9b39be18770d11421cdb1b9947a45dd3f37e93092cbf377614828a319d5fee8" dependencies = [ "hermit-abi", "libc", - "winapi", + "winapi 0.3.9", ] [[package]] @@ -221,6 +540,29 @@ version = "1.1.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "d468802bab17cbc0cc575e9b053f41e72aa36bfa6b7f55e3529ffa43161b97fa" +[[package]] +name = "awc" +version = "1.0.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "d7601d4d1d7ef2335d6597a41b5fe069f6ab799b85f53565ab390e7b7065aac5" +dependencies = [ + "actix-codec 0.2.0", + "actix-http", + "actix-rt", + "actix-service", + "base64 0.11.0", + "bytes 0.5.6", + "derive_more", + "futures-core", + "log", + "mime", + "percent-encoding", + "rand 0.7.3", + "serde", + "serde_json", + "serde_urlencoded 0.6.1", +] + [[package]] name = "axum" version = "0.5.6" @@ -230,22 +572,22 @@ dependencies = [ "async-trait", "axum-core", "bitflags", - "bytes", + "bytes 1.1.0", "futures-util", "http", - "http-body", - "hyper", - "itoa", + "http-body 0.4.5", + "hyper 0.14.19", + "itoa 1.0.2", "matchit", "memchr", "mime", "percent-encoding", - "pin-project-lite", + "pin-project-lite 0.2.9", "serde", "serde_json", - "serde_urlencoded", + "serde_urlencoded 0.7.1", "sync_wrapper", - "tokio", + "tokio 1.21.2", "tower", "tower-http", "tower-layer", @@ -259,19 +601,46 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "da31c0ed7b4690e2c78fe4b880d21cd7db04a346ebc658b4270251b695437f17" dependencies = [ "async-trait", - "bytes", + "bytes 1.1.0", "futures-util", "http", - "http-body", + "http-body 0.4.5", "mime", ] +[[package]] +name = "backtrace" +version = "0.3.66" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "cab84319d616cfb654d03394f38ab7e6f0919e181b1b57e1fd15e7fb4077d9a7" +dependencies = [ + "addr2line", + "cc", + "cfg-if 1.0.0", + "libc", + "miniz_oxide", + "object", + "rustc-demangle", +] + [[package]] name = "base16ct" version = "0.1.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "349a06037c7bf932dd7e7d1f653678b2038b9ad46a74102f1fc7bd7872678cce" +[[package]] +name = "base64" +version = "0.11.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b41b7ea54a0c9d92199de89e20e58d49f02f8e699814ef3fdf266f6f748d15c7" + +[[package]] +name = "base64" +version = "0.12.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "3441f0f7b02788e948e47f457ca01f1d7e6d92c693bc132c22b087d3141c03ff" + [[package]] name = "base64" version = "0.13.0" @@ -299,6 +668,15 @@ version = "1.3.2" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "bef38d45163c2f1dde094a7dfd33ccf595c92905c8f8f4fdc18d06fb1037718a" +[[package]] +name = "block-buffer" +version = "0.9.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "4152116fd6e9dadb291ae18fc1ec3575ed6d84c29642d97890f4b4a3417297e4" +dependencies = [ + "generic-array", +] + [[package]] name = "block-buffer" version = "0.10.2" @@ -308,6 +686,43 @@ dependencies = [ "generic-array", ] +[[package]] +name = "brotli-sys" +version = "0.3.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "4445dea95f4c2b41cde57cc9fee236ae4dbae88d8fcbdb4750fc1bb5d86aaecd" +dependencies = [ + "cc", + "libc", +] + +[[package]] +name = "brotli2" +version = "0.3.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0cb036c3eade309815c15ddbacec5b22c4d1f3983a774ab2eac2e3e9ea85568e" +dependencies = [ + "brotli-sys", + "libc", +] + +[[package]] +name = "bson" +version = "1.2.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "de0aa578035b938855a710ba58d43cfb4d435f3619f99236fb35922a574d6cb1" +dependencies = [ + "base64 0.13.0", + "chrono", + "hex", + "lazy_static", + "linked-hash-map", + "rand 0.7.3", + "serde", + "serde_json", + "uuid", +] + [[package]] name = "bstr" version = "0.2.17" @@ -337,24 +752,60 @@ version = "1.4.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "14c189c53d098945499cdfa7ecc63567cf3886b3332b312a5b4585d8d3a6a610" +[[package]] +name = "bytes" +version = "0.5.6" +source = 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"registry+https://github.com/rust-lang/crates.io-index" checksum = "baf1de4339761588bc0619e3cbc0120ee582ebb74b53b4efbf79117bd2da40fd" +[[package]] +name = "chrono" +version = "0.4.22" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "bfd4d1b31faaa3a89d7934dbded3111da0d2ef28e3ebccdb4f0179f5929d1ef1" +dependencies = [ + "iana-time-zone", + "js-sys", + "num-integer", + "num-traits", + "time 0.1.43", + "wasm-bindgen", + "winapi 0.3.9", +] + [[package]] name = "clap" version = "3.1.18" @@ -394,6 +845,16 @@ dependencies = [ "os_str_bytes", ] +[[package]] +name = "codespan-reporting" +version = "0.11.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "3538270d33cc669650c4b093848450d380def10c331d38c768e34cac80576e6e" +dependencies = [ + "termcolor", + "unicode-width", +] + [[package]] name = "colored" version = "1.9.3" @@ -402,7 +863,7 @@ checksum = "f4ffc801dacf156c5854b9df4f425a626539c3a6ef7893cc0c5084a23f0b6c59" dependencies = [ "atty", "lazy_static", - "winapi", + "winapi 0.3.9", ] [[package]] @@ -448,6 +909,12 @@ version = "0.4.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "6245d59a3e82a7fc217c5828a6692dbc6dfb63a0c8c90495621f7b9d79704a0e" +[[package]] +name = "copyless" +version = "0.1.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "a2df960f5d869b2dd8532793fde43eb5427cceb126c929747a26823ab0eeb536" + [[package]] name = "core-foundation" version = "0.9.3" @@ -473,6 +940,15 @@ dependencies = [ "libc", ] +[[package]] +name = "crc32fast" +version = "1.3.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b540bd8bc810d3885c6ea91e2018302f68baba2129ab3e88f32389ee9370880d" +dependencies = [ + "cfg-if 1.0.0", +] + [[package]] name = "crypto-bigint" version = "0.3.2" @@ -480,7 +956,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "03c6a1d5fa1de37e071642dfa44ec552ca5b299adb128fab16138e24b548fd21" dependencies = [ "generic-array", - "rand_core", + "rand_core 0.6.3", "subtle", "zeroize", ] @@ -495,6 +971,60 @@ dependencies = [ "typenum", ] +[[package]] +name = "crypto-mac" +version = "0.11.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b1d1a86f49236c215f271d40892d5fc950490551400b02ef360692c29815c714" +dependencies = [ + "generic-array", + "subtle", +] + +[[package]] +name = "cxx" +version = "1.0.78" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "19f39818dcfc97d45b03953c1292efc4e80954e1583c4aa770bac1383e2310a4" +dependencies = [ + "cc", + "cxxbridge-flags", + "cxxbridge-macro", + "link-cplusplus", +] + +[[package]] +name = "cxx-build" +version = "1.0.78" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "3e580d70777c116df50c390d1211993f62d40302881e54d4b79727acb83d0199" +dependencies = [ + "cc", + "codespan-reporting", + "once_cell", + "proc-macro2", + "quote", + "scratch", + "syn", +] + +[[package]] +name = "cxxbridge-flags" +version = "1.0.78" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "56a46460b88d1cec95112c8c363f0e2c39afdb237f60583b0b36343bf627ea9c" + +[[package]] +name = "cxxbridge-macro" +version = "1.0.78" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "747b608fecf06b0d72d440f27acc99288207324b793be2c17991839f3d4995ea" +dependencies = [ + "proc-macro2", + "quote", + "syn", +] + [[package]] name = "darling" version = "0.13.4" @@ -536,6 +1066,19 @@ version = "2.3.2" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "3ee2393c4a91429dffb4bedf19f4d6abf27d8a732c8ce4980305d782e5426d57" +[[package]] +name = "data-server" +version = "0.1.0" +dependencies = [ + "actix-rt", + "actix-web", + "bson", + "chrono", + "futures", + "mongodb", + "serde", +] + [[package]] name = "der" version = "0.5.1" @@ -554,6 +1097,17 @@ dependencies = [ "const-oid 0.9.0", ] +[[package]] +name = "derivative" +version = "2.2.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "fcc3dd5e9e9c0b295d6e1e4d811fb6f157d5ffd784b8d202fc62eac8035a770b" +dependencies = [ + "proc-macro2", + "quote", + "syn", +] + [[package]] name = "derive_more" version = "0.99.17" @@ -594,7 +1148,7 @@ version = "0.10.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "f2fb860ca6fafa5552fb6d0e816a69c8e49f0908bf524e30a90d97c85892d506" dependencies = [ - "block-buffer", + "block-buffer 0.10.2", "crypto-common", ] @@ -604,7 +1158,7 @@ version = "2.0.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "339ee130d97a610ea5a5872d2bbb130fdf68884ff09d3028b81bec8a1ac23bbc" dependencies = [ - "cfg-if", + "cfg-if 1.0.0", "dirs-sys-next", ] @@ -616,7 +1170,7 @@ checksum = "4ebda144c4fe02d1f7ea1a7d9641b6fc6b580adcfa024ae48797ecdeb6825b4d" dependencies = [ "libc", "redox_users", - "winapi", + "winapi 0.3.9", ] [[package]] @@ -625,6 +1179,12 @@ version = "0.3.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "fea41bba32d969b513997752735605054bc0dfa92b4c56bf1189f2e174be7a10" +[[package]] +name = "dtoa" +version = "0.4.8" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "56899898ce76aaf4a0f24d914c97ea6ed976d42fec6ad33fcbb0a1103e07b2b0" + [[package]] name = "ecdsa" version = "0.13.4" @@ -664,27 +1224,75 @@ dependencies = [ "crypto-bigint", "der 0.5.1", "generic-array", - "rand_core", + "rand_core 0.6.3", "sec1", "subtle", "zeroize", ] [[package]] -name = "encoding_rs" -version = "0.8.31" +name = "encoding_rs" +version = "0.8.31" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "9852635589dc9f9ea1b6fe9f05b50ef208c85c834a562f0c6abb1c475736ec2b" +dependencies = [ + "cfg-if 1.0.0", +] + +[[package]] +name = "enum-as-inner" +version = "0.3.4" +source = 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dependencies = [ - "cfg-if", + "backtrace", + "failure_derive", ] [[package]] -name = "env-var-helpers" -version = "0.1.0" -source = "git+https://github.com/PiDelport/rust-env-var-helpers#8aed1f58daf2e68b880e2dc0defa3650987e69c6" +name = "failure_derive" +version = "0.1.8" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "aa4da3c766cd7a0db8242e326e9e4e081edd567072893ed320008189715366a4" dependencies = [ - "thiserror", + "proc-macro2", + "quote", + "syn", + "synstructure", ] [[package]] @@ -706,6 +1314,16 @@ dependencies = [ "instant", ] +[[package]] +name = "flate2" +version = "1.0.24" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f82b0f4c27ad9f8bfd1f3208d882da2b09c301bc1c828fd3a00d0216d2fbbff6" +dependencies = [ + "crc32fast", + "miniz_oxide", +] + [[package]] name = "fnv" version = "1.0.7" @@ -747,6 +1365,37 @@ dependencies = [ "num", ] +[[package]] +name = "fuchsia-zircon" +version = "0.3.3" +source = 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dependencies = [ "bitflags", - "cfg-if", + "cfg-if 1.0.0", "foreign-types", "libc", "once_cell", @@ -1396,6 +2444,16 @@ dependencies = [ "vcpkg", ] +[[package]] +name = "os_info" +version = "3.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c4750134fb6a5d49afc80777394ad5d95b04bc12068c6abb92fae8f43817270f" +dependencies = [ + "log", + "winapi 0.3.9", +] + [[package]] name = "os_str_bytes" version = "6.1.0" @@ -1424,6 +2482,17 @@ dependencies = [ "sec1", ] +[[package]] +name = "parking_lot" +version = "0.11.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7d17b78036a60663b797adeaee46f5c9dfebb86948d1255007a1d6be0271ff99" +dependencies = [ + "instant", + "lock_api", + "parking_lot_core 0.8.5", +] + [[package]] name = "parking_lot" version = "0.12.1" @@ -1431,7 +2500,21 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "3742b2c103b9f06bc9fff0a37ff4912935851bee6d36f3c02bcc755bcfec228f" dependencies = [ "lock_api", - "parking_lot_core", + "parking_lot_core 0.9.3", +] + +[[package]] +name = "parking_lot_core" +version = "0.8.5" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "d76e8e1493bcac0d2766c42737f34458f1c8c50c0d23bcb24ea953affb273216" +dependencies = [ + "cfg-if 1.0.0", + "instant", + "libc", + "redox_syscall", + "smallvec", + "winapi 0.3.9", ] [[package]] @@ -1440,7 +2523,7 @@ version = "0.9.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "09a279cbf25cb0757810394fbc1e359949b59e348145c643a939a525692e6929" dependencies = [ - "cfg-if", + "cfg-if 1.0.0", "libc", "redox_syscall", "smallvec", @@ -1459,19 +2542,48 @@ version = "0.2.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "8835116a5c179084a830efb3adc117ab007512b535bc1a21c991d3b32a6b44dd" +[[package]] +name = "pbkdf2" +version = "0.8.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "d95f5254224e617595d2cc3cc73ff0a5eaf2637519e25f03388154e9378b6ffa" +dependencies = [ + "crypto-mac", +] + [[package]] name = "percent-encoding" version = "2.1.0" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "d4fd5641d01c8f18a23da7b6fe29298ff4b55afcccdf78973b24cf3175fee32e" +[[package]] +name = "pin-project" +version = "0.4.30" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "3ef0f924a5ee7ea9cbcea77529dba45f8a9ba9f622419fe3386ca581a3ae9d5a" +dependencies = [ + "pin-project-internal 0.4.30", +] + [[package]] name = "pin-project" version = "1.0.10" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "58ad3879ad3baf4e44784bc6a718a8698867bb991f8ce24d1bcbe2cfb4c3a75e" dependencies = [ - "pin-project-internal", + "pin-project-internal 1.0.10", +] + +[[package]] +name = "pin-project-internal" +version = "0.4.30" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "851c8d0ce9bebe43790dedfc86614c23494ac9f423dd618d3a61fc693eafe61e" +dependencies = [ + "proc-macro2", + "quote", + "syn", ] [[package]] @@ -1485,6 +2597,12 @@ dependencies = [ "syn", ] +[[package]] +name = "pin-project-lite" +version = "0.1.12" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "257b64915a082f7811703966789728173279bdebb956b143dbcd23f6f970a777" + [[package]] name = "pin-project-lite" version = "0.2.9" @@ -1579,6 +2697,12 @@ dependencies = [ "unicode-ident", ] +[[package]] +name = "quick-error" +version = "1.2.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "a1d01941d82fa2ab50be1e79e6714289dd7cde78eba4c074bc5a4374f650dfe0" + [[package]] name = "quote" version = "1.0.18" @@ -1588,6 +2712,20 @@ dependencies = [ "proc-macro2", ] +[[package]] +name = "rand" +version = "0.7.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "6a6b1679d49b24bbfe0c803429aa1874472f50d9b363131f0e89fc356b544d03" +dependencies = [ + "getrandom 0.1.16", + "libc", + "rand_chacha 0.2.2", + "rand_core 0.5.1", + "rand_hc", + "rand_pcg", +] + [[package]] name = "rand" version = "0.8.5" @@ -1595,8 +2733,18 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "34af8d1a0e25924bc5b7c43c079c942339d8f0a8b57c39049bef581b46327404" dependencies = [ "libc", - "rand_chacha", - "rand_core", + "rand_chacha 0.3.1", + "rand_core 0.6.3", +] + +[[package]] +name = "rand_chacha" +version = "0.2.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f4c8ed856279c9737206bf725bf36935d8666ead7aa69b52be55af369d193402" +dependencies = [ + "ppv-lite86", + "rand_core 0.5.1", ] [[package]] @@ -1606,7 +2754,16 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "e6c10a63a0fa32252be49d21e7709d4d4baf8d231c2dbce1eaa8141b9b127d88" dependencies = [ "ppv-lite86", - "rand_core", + "rand_core 0.6.3", +] + +[[package]] +name = "rand_core" +version = "0.5.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "90bde5296fc891b0cef12a6d03ddccc162ce7b2aff54160af9338f8d40df6d19" +dependencies = [ + "getrandom 0.1.16", ] [[package]] @@ -1615,7 +2772,25 @@ version = "0.6.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "d34f1408f55294453790c48b2f1ebbb1c5b4b7563eb1f418bcfcfdbb06ebb4e7" dependencies = [ - "getrandom", + "getrandom 0.2.6", +] + +[[package]] +name = "rand_hc" +version = "0.2.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "ca3129af7b92a17112d59ad498c6f81eaf463253766b90396d39ea7a39d6613c" +dependencies = [ + "rand_core 0.5.1", +] + +[[package]] +name = "rand_pcg" +version = "0.2.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "16abd0c1b639e9eb4d7c50c0b8100b0d0f849be2349829c740fe8e6eb4816429" +dependencies = [ + "rand_core 0.5.1", ] [[package]] @@ -1633,7 +2808,7 @@ version = "0.4.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "b033d837a7cf162d7993aded9304e30a83213c648b6e389db233191f891e5c2b" dependencies = [ - "getrandom", + "getrandom 0.2.6", "redox_syscall", "thiserror", ] @@ -1667,7 +2842,44 @@ version = "0.5.3" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "3acd125665422973a33ac9d3dd2df85edad0f4ae9b00dafb1a05e43a9f5ef8e7" dependencies = [ - "winapi", + "winapi 0.3.9", +] + +[[package]] +name = "reqwest" +version = "0.10.10" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0718f81a8e14c4dbb3b34cf23dc6aaf9ab8a0dfec160c534b3dbca1aaa21f47c" +dependencies = [ + "base64 0.13.0", + "bytes 0.5.6", + "encoding_rs", + "futures-core", + "futures-util", + "http", + "http-body 0.3.1", + "hyper 0.13.10", + "hyper-rustls", + "ipnet", + "js-sys", + "lazy_static", + "log", + "mime", + "mime_guess", + "percent-encoding", + "pin-project-lite 0.2.9", + "rustls 0.18.1", + "serde", + "serde_json", + "serde_urlencoded 0.7.1", + "tokio 0.2.25", + "tokio-rustls 0.14.1", + "url", + "wasm-bindgen", + "wasm-bindgen-futures", + "web-sys", + "webpki-roots 0.20.0", + "winreg 0.7.0", ] [[package]] @@ -1676,15 +2888,15 @@ version = "0.11.10" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "46a1f7aa4f35e5e8b4160449f51afc758f0ce6454315a9fa7d0d113e958c41eb" dependencies = [ - "base64", - "bytes", + "base64 0.13.0", + "bytes 1.1.0", "encoding_rs", "futures-core", "futures-util", - "h2", + "h2 0.3.13", "http", - "http-body", - "hyper", + "http-body 0.4.5", + "hyper 0.14.19", "hyper-tls", "ipnet", "js-sys", @@ -1693,17 +2905,37 @@ dependencies = [ "mime", "native-tls", "percent-encoding", - "pin-project-lite", + "pin-project-lite 0.2.9", "serde", "serde_json", - "serde_urlencoded", - "tokio", + "serde_urlencoded 0.7.1", + "tokio 1.21.2", "tokio-native-tls", "url", "wasm-bindgen", "wasm-bindgen-futures", "web-sys", - "winreg", + "winreg 0.10.1", +] + +[[package]] +name = "resolv-conf" +version = "0.6.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "11834e137f3b14e309437a8276714eed3a80d1ef894869e510f2c0c0b98b9f4a" +dependencies = [ + "hostname", + "quick-error", +] + +[[package]] +name = "resolv-conf" +version = "0.7.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "52e44394d2086d010551b14b53b1f24e31647570cd1deb0379e2c21b329aba00" +dependencies = [ + "hostname", + "quick-error", ] [[package]] @@ -1718,7 +2950,7 @@ dependencies = [ "spin", "untrusted", "web-sys", - "winapi", + "winapi 0.3.9", ] [[package]] @@ -1760,6 +2992,12 @@ dependencies = [ "serde", ] +[[package]] +name = "rustc-demangle" +version = "0.1.21" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "7ef03e0a2b150c7a90d01faf6254c9c48a41e95fb2a8c2ac1c6f0d2b9aefc342" + [[package]] name = "rustc_version" version = "0.4.0" @@ -1769,6 +3007,47 @@ dependencies = [ "semver", ] +[[package]] +name = "rustls" +version = "0.17.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c0d4a31f5d68413404705d6982529b0e11a9aacd4839d1d6222ee3b8cb4015e1" +dependencies = [ + "base64 0.11.0", + "log", + "ring", + "sct", + "webpki", +] + +[[package]] +name = "rustls" +version = "0.18.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "5d1126dcf58e93cee7d098dbda643b5f92ed724f1f6a63007c1116eed6700c81" +dependencies = [ + "base64 0.12.3", + "log", + "ring", + "sct", + "webpki", +] + +[[package]] +name = "rustls-pemfile" +version = "0.2.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "5eebeaeb360c87bfb72e84abdb3447159c0eaececf1bef2aecd65a8be949d1c9" +dependencies = [ + "base64 0.13.0", +] + +[[package]] +name = "rustversion" +version = "1.0.9" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = 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"c0edd1e5b14653f783770bce4a4dabb4a5108a5370a5f5d8cfe8710c361f6c8b" + +[[package]] +name = "unicode-xid" +version = "0.2.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "f962df74c8c05a667b5ee8bcf162993134c104e96440b663c8daa176dc772d8c" + [[package]] name = "untrusted" version = "0.7.1" @@ -2315,6 +3938,9 @@ name = "uuid" version = "0.8.2" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "bc5cf98d8186244414c848017f0e2676b3fcb46807f6668a97dfe67359a3c4b7" +dependencies = [ + "getrandom 0.2.6", +] [[package]] name = "vcpkg" @@ -2344,7 +3970,7 @@ source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "808cf2735cd4b6866113f648b791c6adc5714537bc222d9347bb203386ffda56" dependencies = [ "same-file", - "winapi", + "winapi 0.3.9", "winapi-util", ] @@ -2358,6 +3984,12 @@ dependencies = [ "try-lock", ] +[[package]] +name = "wasi" +version = "0.9.0+wasi-snapshot-preview1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "cccddf32554fecc6acb585f82a32a72e28b48f8c4c1883ddfeeeaa96f7d8e519" + [[package]] name = "wasi" version = "0.10.2+wasi-snapshot-preview1" @@ -2376,7 +4008,9 @@ version = "0.2.80" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "27370197c907c55e3f1a9fbe26f44e937fe6451368324e009cba39e139dc08ad" dependencies = [ - "cfg-if", + "cfg-if 1.0.0", + "serde", + "serde_json", "wasm-bindgen-macro", ] @@ -2401,7 +4035,7 @@ version = "0.4.30" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "6f741de44b75e14c35df886aff5f1eb73aa114fa5d4d00dcd37b5e01259bf3b2" dependencies = [ - "cfg-if", + "cfg-if 1.0.0", "js-sys", "wasm-bindgen", "web-sys", @@ -2446,6 +4080,46 @@ dependencies = [ "wasm-bindgen", ] +[[package]] +name = "webpki" +version = "0.21.4" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b8e38c0608262c46d4a56202ebabdeb094cef7e560ca7a226c6bf055188aa4ea" +dependencies = [ + "ring", + "untrusted", +] + +[[package]] +name = "webpki-roots" +version = "0.20.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0f20dea7535251981a9670857150d571846545088359b28e4951d350bdaf179f" +dependencies = [ + "webpki", +] + +[[package]] +name = "webpki-roots" +version = "0.21.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "aabe153544e473b775453675851ecc86863d2a81d786d741f6b76778f2a48940" +dependencies = [ + "webpki", +] + +[[package]] +name = "widestring" +version = "0.4.3" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "c168940144dd21fd8046987c16a46a33d5fc84eec29ef9dcddc2ac9e31526b7c" + +[[package]] +name = "winapi" +version = "0.2.8" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "167dc9d6949a9b857f3451275e911c3f44255842c1f7a76f33c55103a909087a" + [[package]] name = "winapi" version = "0.3.9" @@ -2456,6 +4130,12 @@ dependencies = [ "winapi-x86_64-pc-windows-gnu", ] +[[package]] +name = "winapi-build" +version = "0.1.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "2d315eee3b34aca4797b2da6b13ed88266e6d612562a0c46390af8299fc699bc" + [[package]] name = "winapi-i686-pc-windows-gnu" version = "0.4.0" @@ -2468,7 +4148,7 @@ version = "0.1.5" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "70ec6ce85bb158151cae5e5c87f95a8e97d2c0c4b001223f33a334e3ce5de178" dependencies = [ - "winapi", + "winapi 0.3.9", ] [[package]] @@ -2520,13 +4200,41 @@ version = "0.36.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "c811ca4a8c853ef420abd8592ba53ddbbac90410fab6903b3e79972a631f7680" +[[package]] +name = "winreg" +version = "0.6.2" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "b2986deb581c4fe11b621998a5e53361efe6b48a151178d0cd9eeffa4dc6acc9" +dependencies = [ + "winapi 0.3.9", +] + +[[package]] +name = "winreg" +version = "0.7.0" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "0120db82e8a1e0b9fb3345a539c478767c0048d842860994d96113d5b667bd69" +dependencies = [ + "winapi 0.3.9", +] + [[package]] name = "winreg" version = "0.10.1" source = "registry+https://github.com/rust-lang/crates.io-index" checksum = "80d0f4e272c85def139476380b12f9ac60926689dd2e01d4923222f40580869d" dependencies = [ - "winapi", + "winapi 0.3.9", +] + +[[package]] +name = "ws2_32-sys" +version = "0.2.1" +source = "registry+https://github.com/rust-lang/crates.io-index" +checksum = "d59cefebd0c892fa2dd6de581e937301d8552cb44489cdff035c6187cb63fa5e" +dependencies = [ + "winapi 0.2.8", + "winapi-build", ] [[package]] diff --git a/rust-workspace/Cargo.toml b/rust-workspace/Cargo.toml index 4216c62..528e859 100644 --- a/rust-workspace/Cargo.toml +++ b/rust-workspace/Cargo.toml @@ -1,2 +1,5 @@ [workspace] -members = ['crates/*'] +members = [ + 'crates/*', + 'projects/*', +] \ No newline at end of file diff --git a/rust-workspace/projects/data-server/Cargo.toml b/rust-workspace/projects/data-server/Cargo.toml new file mode 100644 index 0000000..2763d9a --- /dev/null +++ b/rust-workspace/projects/data-server/Cargo.toml @@ -0,0 +1,16 @@ +[package] +name = "data-server" +version = "0.1.0" +authors = ["Nautilus team"] +edition = "2021" + +# See more keys and their definitions at https://doc.rust-lang.org/cargo/reference/manifest.html + +[dependencies] +mongodb = "1.0.0" #Change version for compatibility +bson = "1.0.0" +serde = { version = "1.0", features = ["derive"] } +actix-rt = "1.1.1" +actix-web = "2.0" +futures = "0.3.5" +chrono = "0.4.11" diff --git a/rust-workspace/projects/data-server/src/data_handlers/mod.rs b/rust-workspace/projects/data-server/src/data_handlers/mod.rs new file mode 100644 index 0000000..701d966 --- /dev/null +++ b/rust-workspace/projects/data-server/src/data_handlers/mod.rs @@ -0,0 +1,87 @@ +use actix_web::{web, HttpResponse, Responder}; +use bson::{doc, Bson}; +use chrono::prelude::*; +use futures::stream::StreamExt; +use mongodb::{options::FindOptions, Client}; +use serde::Deserialize; +use std::sync::Mutex; + +#[derive(Deserialize)] +pub struct UserData { + pub id: String, +} + +#[derive(Deserialize)] +pub struct NewDataPool { + pub id: String, + pub pool_name: String, //User defined pool name + pub sealed_data: String, //Update data format to match sealed data +} + +// Mongo DB (CosmosDB) Name +const MONGO_DB: &'static str = "ntc-data"; +// Mongo Collection Name +const MONGO_COLLECTION: &'static str = "datapools"; + +pub fn scoped_config(cfg: &mut web::ServiceConfig) { + cfg.service( + web::resource("/data") + .route(web::get().to(get_data)) + .route(web::post().to(add_data)), + ); +} + +// This function accepts application data +async fn get_data( + data: web::Data>, + existing_user: web::Json, +) -> impl Responder { + let data_collection = data + .lock() + .unwrap() + .database(MONGO_DB) + .collection(MONGO_COLLECTION); + + let user_id = &existing_user.id; + let filter = doc! {"user_id": user_id}; + let find_options = FindOptions::builder().sort(doc! { "_id": -1}).build(); + let mut cursor = data_collection.find(filter, find_options).await.unwrap(); + + let mut results = Vec::new(); + while let Some(result) = cursor.next().await { + match result { + Ok(document) => { + results.push(document); + } + _ => { + return HttpResponse::InternalServerError().finish(); + } + } + } + HttpResponse::Ok().json(results) +} + +async fn add_data( + data: web::Data>, + new_pool: web::Json, +) -> impl Responder { + let data_collection = data + .lock() + .unwrap() + .database(MONGO_DB) + .collection(MONGO_COLLECTION); + + match data_collection.insert_one(doc! {"user_id": &new_pool.id, "pool_name": &new_pool.pool_name, "sealed_data": &new_pool.sealed_data, "created_on": Bson::DateTime(Utc::now())}, None).await { + Ok(db_result) => { + if let Some(new_id) = db_result.inserted_id.as_object_id() { + println!("New document inserted with id {}", new_id); + } + return HttpResponse::Created().json(db_result.inserted_id) + } + Err(err) => + { + println!("Failed! {}", err); + return HttpResponse::InternalServerError().finish() + } + } +} diff --git a/rust-workspace/projects/data-server/src/main.rs b/rust-workspace/projects/data-server/src/main.rs new file mode 100644 index 0000000..5830d03 --- /dev/null +++ b/rust-workspace/projects/data-server/src/main.rs @@ -0,0 +1,24 @@ +use actix_web::{web, App, HttpServer}; +use mongodb::{options::ClientOptions, Client}; +use std::env; +use std::sync::*; + +mod data_handlers; + +#[actix_rt::main] +async fn main() -> std::io::Result<()> { + // Create log for actix to output errors + env::set_var("RUST_LOG", "actix_web=debug"); + // Remember to set connection string when starting the server + let mongo_url = env::var("CONNECTION_STRING").unwrap(); + let client_options = ClientOptions::parse(&mongo_url).await.unwrap(); + let client = web::Data::new(Mutex::new(Client::with_options(client_options).unwrap())); + HttpServer::new(move || { + App::new() + .app_data(client.clone()) + .service(web::scope("/api").configure(data_handlers::scoped_config)) + }) + .bind("127.0.0.1:8000")? + .run() + .await +}