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Merge pull request #432 from obophenotype/NTR_uberon-entity-attribute_terms
Added 3 new entity-attribute (anatomy) terms
2 parents 3e56839 + 927cdab commit 07f4b71

3 files changed

Lines changed: 46 additions & 39 deletions

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‎src/ontology/imports/merged_import.owl‎

Lines changed: 10 additions & 37 deletions
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@@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
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Ontology(<http://purl.obolibrary.org/obo/oba/imports/merged_import.owl>
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<http://purl.obolibrary.org/obo/oba/releases/2026-06-12/imports/merged_import.owl>
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Annotation(owl:versionInfo "2026-06-12")
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<http://purl.obolibrary.org/obo/oba/releases/2026-06-16/imports/merged_import.owl>
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Annotation(owl:versionInfo "2026-06-16")
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Declaration(Class(<http://identifiers.org/ensembl/ENSG00000038945>))
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Declaration(Class(<http://identifiers.org/ensembl/ENSG00000051128>))
@@ -1621,8 +1621,6 @@ Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33482>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33484>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33485>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33497>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33498>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33499>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33504>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33508>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33513>))
@@ -1677,7 +1675,6 @@ Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33673>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33674>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33675>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33676>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33677>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33692>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33693>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_33694>))
@@ -2568,8 +2565,6 @@ Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50513>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50514>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50523>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50525>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50558>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50559>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50584>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50629>))
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Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_50630>))
@@ -52285,6 +52280,7 @@ Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002610>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002613>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002616>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002618>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002624>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002629>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002633>))
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Declaration(Class(<http://purl.obolibrary.org/obo/UBERON_0002634>))
@@ -60535,7 +60531,7 @@ AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0004023> "caus
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SubObjectPropertyOf(<http://purl.obolibrary.org/obo/RO_0004023> <http://purl.obolibrary.org/obo/RO_0002410>)
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SubObjectPropertyOf(<http://purl.obolibrary.org/obo/RO_0004023> <http://purl.obolibrary.org/obo/RO_0040035>)
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# Object Property: <http://purl.obolibrary.org/obo/RO_0004024> (disease disrupts)
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# Object Property: <http://purl.obolibrary.org/obo/RO_0004024> (disease causes disruption of)
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AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/RO_0004024> "A relationship between a disease and a process where the disease process disrupts the execution of the process.")
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/RO_0004024> "disease causes disruption of")
@@ -73637,18 +73633,6 @@ AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_33497> "tra
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33497> <http://purl.obolibrary.org/obo/CHEBI_23367>)
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33497> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/CHEBI_27081>))
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# Class: <http://purl.obolibrary.org/obo/CHEBI_33498> (actinoid molecular entity)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_33498> "actinoid molecular entity")
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33498> <http://purl.obolibrary.org/obo/CHEBI_33677>)
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33498> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/CHEBI_33320>))
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# Class: <http://purl.obolibrary.org/obo/CHEBI_33499> (uranium molecular entity)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_33499> "uranium molecular entity")
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33499> <http://purl.obolibrary.org/obo/CHEBI_33498>)
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33499> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/CHEBI_27214>))
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# Class: <http://purl.obolibrary.org/obo/CHEBI_33504> (alkali metal cation)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_33504> "alkali metal cation")
@@ -74001,13 +73985,6 @@ AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_33676> "d-b
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33676> <http://purl.obolibrary.org/obo/CHEBI_33497>)
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33676> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/CHEBI_33561>))
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# Class: <http://purl.obolibrary.org/obo/CHEBI_33677> (f-block molecular entity)
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AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/CHEBI_33677> "A molecular entity containing one or more atoms of an f-block element.")
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_33677> "f-block molecular entity")
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33677> <http://purl.obolibrary.org/obo/CHEBI_33497>)
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_33677> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000051> <http://purl.obolibrary.org/obo/CHEBI_33562>))
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# Class: <http://purl.obolibrary.org/obo/CHEBI_33692> (hydrides)
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AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/CHEBI_33692> "Hydrides are chemical compounds of hydrogen with other chemical elements.")
@@ -80080,16 +80057,6 @@ AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.ob
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_50525> "phenolate anion")
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_50525> <http://purl.obolibrary.org/obo/CHEBI_25696>)
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# Class: <http://purl.obolibrary.org/obo/CHEBI_50558> (monoatomic uranium)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_50558> "monoatomic uranium")
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_50558> <http://purl.obolibrary.org/obo/CHEBI_50559>)
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# Class: <http://purl.obolibrary.org/obo/CHEBI_50559> (elemental uranium)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/CHEBI_50559> "elemental uranium")
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SubClassOf(<http://purl.obolibrary.org/obo/CHEBI_50559> <http://purl.obolibrary.org/obo/CHEBI_33499>)
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# Class: <http://purl.obolibrary.org/obo/CHEBI_50584> (alkyl alcohol)
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AnnotationAssertion(<http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/CHEBI_50584> "An aliphatic alcohol in which the aliphatic alkane chain is substituted by a hydroxy group at unspecified position.")
@@ -477777,6 +477744,12 @@ SubClassOf(<http://purl.obolibrary.org/obo/UBERON_0002618> <http://purl.obolibra
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SubClassOf(<http://purl.obolibrary.org/obo/UBERON_0002618> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0002298>))
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SubClassOf(<http://purl.obolibrary.org/obo/UBERON_0002618> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/uberon/core#extends_fibers_into> <http://purl.obolibrary.org/obo/UBERON_0001644>))
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# Class: <http://purl.obolibrary.org/obo/UBERON_0002624> (orbital part of inferior frontal gyrus)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/UBERON_0002624> "orbital part of inferior frontal gyrus")
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SubClassOf(<http://purl.obolibrary.org/obo/UBERON_0002624> <http://purl.obolibrary.org/obo/UBERON_0015593>)
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SubClassOf(<http://purl.obolibrary.org/obo/UBERON_0002624> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0002998>))
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# Class: <http://purl.obolibrary.org/obo/UBERON_0002629> (triangular part of inferior frontal gyrus)
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AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/UBERON_0002629> "triangular part of inferior frontal gyrus")

‎src/patterns/data/default/entity_attribute.tsv‎

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Original file line numberDiff line numberDiff line change
@@ -4238,3 +4238,6 @@ OBA:2090004 carotid artery intima-media region thickness UBERON:1200002 carotid
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OBA:2100003 cortex of kidney volume UBERON:0001225 cortex of kidney PATO:0000918 volume PMID:41077127 https://orcid.org/0000-0001-6757-4744
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OBA:2100004 renal medulla volume UBERON:0000362 renal medulla PATO:0000918 volume PMID:41077127 https://orcid.org/0000-0001-6757-4744
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OBA:2100005 renal sinus volume UBERON:0006171 renal sinus PATO:0000918 volume PMID:41077127 https://orcid.org/0000-0001-6757-4744
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OBA:2100041 orbital part of inferior frontal gyrus volume UBERON:0002624 orbital part of inferior frontal gyrus PATO:0000918 volume https://orcid.org/0000-0001-6757-4744
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OBA:2100042 heart volume UBERON:0000948 heart PATO:0000918 volume https://orcid.org/0000-0001-6757-4744
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OBA:2100043 vena cava size trait UBERON:0004087 vena cava PATO:0000117 size https://orcid.org/0000-0001-6757-4744

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