Add sample volume term (OBA:2100003)

Co-authored-by: aleixpuigb <94959119+aleixpuigb@users.noreply.github.com>

Author: Copilot

src/patterns/data/default/entity_attribute.tsv

@@ -4234,3 +4234,4 @@ OBA:2050119	gene expression attribute	GO:0010467	gene expression	PATO:0001236	pr
 OBA:2045562	evoked neurotransmitter secretion attribute	GO:0061670	evoked neurotransmitter secretion	PATO:0001236	process quality			https://orcid.org/0000-0001-8314-2140
 OBA:VT0005372	life span determination trait	GO:0008340	determination of adult lifespan	PATO:0001236	process quality	life span trait|lifespan determination trait|life span duration trait|lifespan duration trait		https://orcid.org/0000-0001-8314-2140
 OBA:2090003	macula lutea attribute	UBERON:0000053	macula lutea	PATO:0000001	quality			https://orcid.org/0000-0001-6677-8489
+OBA:2100003	sample volume	OBI:0100051	specimen	PATO:0000918	volume			

src/patterns/definitions.owl

@@ -7,8 +7,8 @@ Prefix(rdfs:=<http://www.w3.org/2000/01/rdf-schema#>)
 
 
 Ontology(<http://purl.obolibrary.org/obo/oba/patterns/definitions.owl>
-<http://purl.obolibrary.org/obo/oba/releases/2025-12-16/patterns/definitions.owl>
-Annotation(owl:versionInfo "2025-12-16")
+<http://purl.obolibrary.org/obo/oba/releases/2025-12-23/patterns/definitions.owl>
+Annotation(owl:versionInfo "2025-12-23")
 
 Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_10033>))
 Declaration(Class(<http://purl.obolibrary.org/obo/CHEBI_10112>))
@@ -24354,6 +24354,7 @@ Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2090002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2090003>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2100001>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2100002>))
+Declaration(Class(<http://purl.obolibrary.org/obo/OBA_2100003>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_VT0000000>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_VT0000002>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_VT0000003>))
@@ -26684,6 +26685,7 @@ Declaration(Class(<http://purl.obolibrary.org/obo/OBA_VT4000009>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_VT4000011>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBA_VT4000012>))
 Declaration(Class(<http://purl.obolibrary.org/obo/OBI_0003653>))
+Declaration(Class(<http://purl.obolibrary.org/obo/OBI_0100051>))
 Declaration(Class(<http://purl.obolibrary.org/obo/PATO_0000001>))
 Declaration(Class(<http://purl.obolibrary.org/obo/PATO_0000004>))
 Declaration(Class(<http://purl.obolibrary.org/obo/PATO_0000008>))
@@ -229131,6 +229133,13 @@ AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#has
 AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_2100002> "urine zinc amount")
 EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2100002> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000070> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/CHEBI_27365> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0001088>)))))
 
+# Class: <http://purl.obolibrary.org/obo/OBA_2100003> (sample volume)
+
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_2100003> "The volume of a specimen.")
+AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "AUTO:patterns/patterns/entity_attribute") <http://www.geneontology.org/formats/oboInOwl#hasExactSynonym> <http://purl.obolibrary.org/obo/OBA_2100003> "volume of specimen")
+AnnotationAssertion(rdfs:label <http://purl.obolibrary.org/obo/OBA_2100003> "sample volume")
+EquivalentClasses(<http://purl.obolibrary.org/obo/OBA_2100003> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/OBI_0100051>)))
+
 # Class: <http://purl.obolibrary.org/obo/OBA_VT0000000> (mammary gland secreted fluid morphology trait)
 
 AnnotationAssertion(Annotation(<http://www.geneontology.org/formats/oboInOwl#hasDbXref> "obo:oba/patterns/entity_attribute_part_of") <http://purl.obolibrary.org/obo/IAO_0000115> <http://purl.obolibrary.org/obo/OBA_VT0000000> "The morphology of a mammary gland fluid/secretion.")
@@ -248343,6 +248352,7 @@ SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000915> Ob
 SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/CL_0000000>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/CL_0000000>))))
 SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/CL_0000232>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/CL_0000232>))))
 SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/CL_0000233>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/CL_0000233>))))
+SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/OBI_0100051>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/OBI_0100051>))))
 SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0000173>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0000173>))))
 SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0000178>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0000178>))))
 SubClassOf(ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> <http://purl.obolibrary.org/obo/UBERON_0000945>))) ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/BFO_0000050> ObjectIntersectionOf(<http://purl.obolibrary.org/obo/PATO_0000918> ObjectSomeValuesFrom(<http://purl.obolibrary.org/obo/RO_0000052> <http://purl.obolibrary.org/obo/UBERON_0000945>))))