copilot-setup-steps.yml

name: "Copilot Setup Steps"

# Automatically run the setup steps when they are changed to allow for easy validation, and
# allow manual testing through the repository's "Actions" tab
on:
  workflow_dispatch:
  push:
    paths:
      - .github/workflows/copilot-setup-steps.yml
  pull_request:
    paths:
      - .github/workflows/copilot-setup-steps.yml

jobs:
  # The job MUST be called `copilot-setup-steps` or it will not be picked up by Copilot.
  copilot-setup-steps:
    runs-on: ubuntu-latest

    # Set the permissions to the lowest permissions possible needed for your steps.
    # Copilot will be given its own token for its operations.
    permissions:
      # If you want to clone the repository as part of your setup steps, for example to install dependencies, you'll need the `contents: read` permission. If you don't clone the repository in your setup steps, Copilot will do this for you automatically after the steps complete.
      contents: read

    # You can define any steps you want, and they will run before the agent starts.
    # If you do not check out your code, Copilot will do this for you.
    steps:
    - name: Checkout code
      uses: actions/checkout@v4

    - name: Create tools directory
      run: mkdir -p ${{ github.workspace }}/tools
      shell: bash

    - name: Cache ROBOT JAR files
      uses: actions/cache@v4
      with:
        path: ~/.jar-cache
        key: ${{ runner.os }}-robot-v1.9.7
        restore-keys: ${{ runner.os }}-robot-

    - name: Download ROBOT JAR if not cached
      run: |
        mkdir -p ~/.jar-cache
        if [ ! -f ~/.jar-cache/robot.jar ]; then
          curl -L https://github.com/ontodev/robot/releases/download/v1.9.7/robot.jar -o ~/.jar-cache/robot.jar
        fi
      shell: bash
    
    - name: Setup ROBOT tools
      run: |
        cp ~/.jar-cache/robot.jar ${{ github.workspace }}/tools/robot.jar
        curl -L https://raw.githubusercontent.com/ontodev/robot/v1.9.7/bin/robot -o ${{ github.workspace }}/tools/robot
        chmod +x ${{ github.workspace }}/tools/robot
        ${{ github.workspace }}/tools/robot --help
      shell: bash

    - name: Add tools to PATH
      run: |
        echo "${{ github.workspace }}/tools" >> $GITHUB_PATH
        ls -alt ${{ github.workspace }}
        ls -alt ${{ github.workspace }}/tools
      shell: bash

    - name: Add obo-scripts to PATH
      run: |
        git clone https://github.com/cmungall/obo-scripts.git ${{ github.workspace }}/tools/obo-scripts
        echo "${{ github.workspace }}/tools/obo-scripts" >> $GITHUB_PATH
      shell: bash
      
    - name: Install uv
      uses: astral-sh/setup-uv@v5

    - name: Install Python tools
      run: |
        uv venv
        source .venv/bin/activate
        uv pip install aurelian jinja2-cli "wrapt>=1.17.2"
      shell: bash