review: abnormallyDecreasedEfficacyOfBiologicalProcess

[chris-grove]

Pattern on branch here:

https://github.com/obophenotype/upheno/blob/New-pattern-abnDecEfficOfBiolProc-June-28-2019/src/patterns/dosdp-dev/abnormallyDecreasedEfficacyOfBiologicalProcess.yaml

pattern_name: abnormallyDecreasedEfficacyOfBiologicalProcess
pattern_iri: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyDecreasedEfficacyOfBiologicalProcess.yaml
description: "An abnormally decreased efficacy of a biological process compared to controls."

contributors:
  - https://orcid.org/0000-0001-9076-6015

classes:
  decreased efficacy: PATO:0015003
  abnormal: PATO:0000460
  biological process: GO:0008150

relations: 
  inheres_in: RO:0000052
  has_modifier: RO:0002573
  has_part: BFO:0000051

annotationProperties:
  exact_synonym: oio:hasExactSynonym 

vars:
  biological_process: "'biological process'"

name:
  text: "decreased efficacy of %s"
  vars:
   - biological_process

annotations:
  - annotationProperty: exact_synonym
    text: "Deficiency of %s"
    vars:
     - biological_process
  - annotationProperty: exact_synonym
    text: "Defective %s"
    vars:
     - biological_process

def:
  text: "Decreased efficacy of %s."
  vars:
    - biological_process

equivalentTo:
  text: "'has_part' some ('decreased efficacy' and ('inheres_in' some %s) and ('has_modifier' some 'abnormal'))"
  vars:
    - biological_process

Comments and suggestions welcome.

[matentzn]

Will close this now in favour of #483