Dependency Dashboard

[renovate]

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.
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Repository Problems

These problems occurred while renovating this repository. View logs.

• ⚠️ WARN: pep440: failed to calculate newValue

Rate-Limited

The following updates are currently rate-limited. To force their creation now, click on a checkbox below.

• Update dependency pixi-kernel to >=0.7.1,<0.8
• Update dependency rioxarray to >=0.20,<0.21
• Update dependency xoak to >=0.2,<0.3
• Update docker/dockerfile Docker tag to v1.20
• Update docker/login-action action to v3.6.0
• Update docker/setup-buildx-action action to v3.12.0
• Update actions/cache action to v5
• Update actions/checkout action to v6
• Update actions/upload-artifact action to v6
• Update continuumio/miniconda3 Docker tag to v25
• Update dependency fastparquet to v2025
• Update dependency fsspec to v2026
• Update dependency gcsfs to v2026
• Update dependency hdf5plugin to v6
• Update dependency imagecodecs to v2026
• Update dependency s3fs to v2026
• 🔐 Create all rate-limited PRs at once 🔐

Open

The following updates have all been created. To force a retry/rebase of any, click on a checkbox below.

• Update dependency pandas to <2.3.4
• Update actions/cache action to v4.3.0
• Update continuumio/miniconda3 Docker tag to v24.11.1
• Update dependency arraylake to >=0.27,<0.28
• Update dependency ipykernel to >=7.1,<8
• Update dependency marimo to >=0.19.2,<0.20
• Update ghcr.io/prefix-dev/pixi Docker tag to v0.62.2
• Update dependency argopy to v1
• Update dependency ffmpeg to v8
• Update dependency ubuntu to v24
• Click on this checkbox to rebase all open PRs at once

PR Closed (Blocked)

The following updates are blocked by an existing closed PR. To recreate the PR, click on a checkbox below.

• Update dependency flox to v9

Detected Dependencies

docker-compose (1)

docker-compose.yml

dockerfile (2)

py-base/Dockerfile (2)

• docker/dockerfile 1.17 → [Updates: 1.20]
• ghcr.io/prefix-dev/pixi 0.53.0-jammy@sha256:3a43a1c0663c8b638836162518ba76a465ff7a0296b00f99e61af88bcf442c5a → [Updates: 0.62.2-jammy]

r/Dockerfile (2)

• docker/dockerfile 1.17 → [Updates: 1.20]
• continuumio/miniconda3 24.7.1-0@sha256:f37f8c7db26ae7ec0098df530e96c9cde139026b9faf3914800d1522c47a49b1 → [Updates: 24.11.1-0, 25.1.1-0]

github-actions (3)

.github/workflows/build-image.yml (8)

• actions/checkout v4 → [Updates: v6]
• docker/setup-buildx-action v3.11.1 → [Updates: v3.12.0]
• actions/cache v4.2.4 → [Updates: v4.3.0, v5.0.1]
• docker/build-push-action v6.18.0
• actions/upload-artifact v4 → [Updates: v6]
• docker/login-action v3.5.0 → [Updates: v3.6.0]
• slackapi/slack-github-action v2.1.1
• ubuntu 22.04 → [Updates: 24.04]

.github/workflows/build-pixi-image.yml (8)

• actions/checkout v4 → [Updates: v6]
• docker/setup-buildx-action v3.11.1 → [Updates: v3.12.0]
• actions/cache v4.2.4 → [Updates: v4.3.0, v5.0.1]
• docker/build-push-action v6.18.0
• actions/upload-artifact v4 → [Updates: v6]
• docker/login-action v3.5.0 → [Updates: v3.6.0]
• slackapi/slack-github-action v2.1.1
• ubuntu 22.04 → [Updates: 24.04]

.github/workflows/shortsha.yml (2)

• actions/checkout v4 → [Updates: v6]
• ubuntu 22.04 → [Updates: 24.04]

pixi (1)

py-base/pixi.toml (95)

• python >=3.12.11,<3.13
• pangeo-notebook >=2025.7.15,<2026
• pixi-kernel >=0.6.6,<0.7 → [Updates: >=0.7.1,<0.8]
• pooch >=1.8.2,<2
• curl >=8.14.1,<9
• git >=2.49.0,<3
• wget >=1.21.4,<2
• tar >=1.35,<2
• vim >=9.1.1627,<10
• gh >=2.76.2,<3
• nano >=8.5,<9
• gh-scoped-creds >=4.1,<5
• zarr >=3.1.1,<4
• netcdf4 >=1.6.5,<2
• s3fs >=2025.7.0,<2026 → [Updates: >=2026.1,<2027]
• ipykernel >=6.30.1,<7 → [Updates: >=7.1,<8]
• flox >=0.10.4,<0.11 → [Updates: >=9.11,<9.12]
• opt_einsum >=3.4.0,<4
• numbagg >=0.9.0,<0.10
• fsspec >=2025.7.0,<2026 → [Updates: >=2026.1,<2027]
• gcsfs >=2025.7.0,<2026 → [Updates: >=2026.1,<2027]
• jupyterlab-git >=0.51.2,<0.52
• tldr >=3.4.1,<4
• jupyter-resource-usage >=1.1.1,<2
• numpy >=2.2.6,<3
• cartopy >=0.25.0,<0.26
• pandas <2.3.3 → [Updates: <2.3.4]
• gsw >=3.6.20,<4
• matplotlib-base >=3.10.5,<4
• seaborn >=0.13.2,<0.14
• cmocean >=4.0.3,<5
• cmcrameri >=1.9,<2
• tqdm >=4.67.1,<5
• argopy >=0.1.14,<0.2 → [Updates: >=1.4,<1.5]
• ipyleaflet >=0.20.0,<0.21
• searvey >=0.3.16,<0.4
• shapely >=2.1.1,<3
• cftime >=1.6.4,<2
• ioos_qc >=2.2.1,<3
• cf_xarray >=0.10.7,<0.11
• erddapy >=2.2.4,<3
• gliderpy >=1.0.0,<2
• cf-xarray >=0.10.7,<0.11
• ipywidgets >=8.1.7,<9
• netcdf4 >=1.6.5,<2
• requests >=2.32.4,<3
• scipy >=1.16.1,<2
• traitlets >=5.14.3,<6
• ipykernel >=6.30.1,<7 → [Updates: >=7.1,<8]
• intake-xarray >=2.0.0,<3
• fsspec >=2025.7.0,<2026 → [Updates: >=2026.1,<2027]
• s3fs >=2025.7.0,<2026 → [Updates: >=2026.1,<2027]
• xarray >=2025.6.0,<2026
• cf_xarray >=0.10.7,<0.11
• zarr >=3.1.1,<4
• xoak >=0.1.1,<0.2 → [Updates: >=0.2,<0.3]
• fastparquet >=2024.11.0,<2025 → [Updates: >=2025.12,<2026]
• dask >=2025.7.0,<2026
• coiled >=1.118.1,<2
• dask-gateway >=2025.4.0,<2026
• datashader >=0.18.2,<0.19
• geoviews >=1.14.1,<2
• hvplot >=0.12.0,<0.13
• panel >=1.7.5,<2
• icechunk >=1.1.2,<2
• virtualizarr >=2.1.1,<3
• h5py >=3.13.0,<4
• hdf5plugin >=5.1.0,<6 → [Updates: >=6,<7]
• imagecodecs >=2025.8.2,<2026 → [Updates: >=2026.1.1,<2027]
• kerchunk >=0.2.9,<0.3
• fastparquet >=2024.11.0,<2025 → [Updates: >=2025.12,<2026]
• arraylake >=0.22.0,<0.23 → [Updates: >=0.27,<0.28]
• python-dotenv *
• langchain *
• langchain-community *
• langchain-openai *
• langchain-huggingface *
• langchain-experimental *
• chromadb *
• marimo >=0.13.6,<0.15 → [Updates: >=0.19.2,<0.20]
• jupyter-marimo-proxy >=0.0.4,<0.0.5
• copernicusmarine >=2.2.1,<3
• cartopy >=0.25.0,<0.26
• ipy >=1.1,<2
• obspy >=1.4.2,<2
• shapely >=2.1.1,<3
• ipywidgets >=8.1.7,<9
• ffmpeg >=7.1.1,<8 → [Updates: >=8.0.1,<9]
• ffmpeg-python >=0.2.0,<0.3
• paramiko >=4.0.0,<5
• imageio >=2.37.0,<3
• pydub >=0.25.1,<0.26
• librosa >=0.11.0,<0.12
• rioxarray >=0.19.0,<0.20 → [Updates: >=0.20,<0.21]
• cartopy >=0.25.0,<0.26

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