short list

Author: Remi-Gau

python/create_neurovault_schema.py

@@ -11,7 +11,7 @@
 # where the metadata from neurovault are described. It is in xlsx folder of this repos
 # but it can also be downloaded from here:
 # https://github.com/NeuroVault/NeuroVault/blob/master/scripts/metadata_neurovault.csv
-input_file = '/home/remi/github/COBIDAS_chckls/xlsx/metadata_neurovault.csv'
+input_file = '/home/remi/github/COBIDAS_chckls/xlsx/metadata_neurovault-test.csv'
 
 # where the files will be written on your machine: the local repository
 # corresponding to the remote where of the schema-standardization will be hosted
@@ -24,7 +24,7 @@
 # to which branch of schema-standardization the user interface will be pointed to
 # In the end the cobidas-UI repository will be reading the schema from the URL that that
 # starts with: remote_repo + branch_name
-branch_name  = 'neurovault-dev'
+branch_name  = 'neurovault-test'
 
 
 ## -----------------------------------------------------------------------------
@@ -137,7 +137,7 @@
                     'schema:schemaVersion': version,
                     'schema:version': version,
                     'variableMap': [],
-                    'preamble': 'How did you design/analyse your study?',
+                    'preamble': 'How did you design / analyse your study?',
                     'ui': {
                         'order': [],
                         'visibility': {},

xlsx/metadata_neurovault-test.csv

@@ -0,0 +1,8 @@
+Source,Section,Item,Verbose description,Format,"Priority (1=required, 2=recommended,3=optional)",Visibility
+fmrimethods.org,ExperimentalDesign,type_of_design,"Blocked, event-related, hybrid, or other","['blocked','event_related','hybrid block/event','Other']",1,1
+fmrimethods.org,Participants,number_of_subjects,Number of subjects entering into the analysis,int,1,1
+fmrimethods.org,MRI_acquisition,scanner_make,Manufacturer of MRI scanner,"['Siemens','Philips','General Electric',’Other’]",1,1
+fmrimethods.org,Preprocessing,software_package,"If a single software package was used for all analyses, specify that here","['SPM','FSL','Freesurfer','Brain voyager','Other']",1,1
+fmrimethods.org,IntersubjectRegistration,used_intersubject_registration,Were subjects registered to a common stereotactic space?,Boolean,1,1
+fmrimethods.org,IndividualSubjectModeling,intrasubject_model_type,Type of group model used,"['Regression','Other']",1,1
+fmrimethods.org,GroupModeling,group_model_type,Type of group model used,"['Regression','Other']",1,1