From 2cd0b1c0713d83ad02cde61673d7aadb4b6a8361 Mon Sep 17 00:00:00 2001
From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com>
Date: Thu, 7 May 2026 22:45:42 +0000
Subject: [PATCH] fix: ensure bizard-skill.zip is reliably included in gh-pages
 deployment

Agent-Logs-Url: https://github.com/openbiox/Bizard/sessions/506f0e2c-501c-4472-aade-bcf3155872b3

Co-authored-by: ShixiangWang <25057508+ShixiangWang@users.noreply.github.com>
---
 .../workflows/quarto-publish-update-cache.yml | 15 ++++++++++
 .github/workflows/quarto-publish.yml          | 30 +++++++++++--------
 .gitignore                                    |  3 ++
 _quarto.yml                                   |  1 +
 4 files changed, 36 insertions(+), 13 deletions(-)

diff --git a/.github/workflows/quarto-publish-update-cache.yml b/.github/workflows/quarto-publish-update-cache.yml
index ad04877767..e07682dedc 100644
--- a/.github/workflows/quarto-publish-update-cache.yml
+++ b/.github/workflows/quarto-publish-update-cache.yml
@@ -234,6 +234,21 @@ jobs:
           fi
           [ $failed -eq 0 ] || exit 1
 
+      # ── Generate skill ZIP ───────────────────────────────────
+      # Must run BEFORE babelquarto so the zip exists at project root when
+      # babelquarto copies the project to its temp dir for rendering.
+      # Quarto then copies it to _site/ via the resources entry in _quarto.yml.
+      - name: Generate unified skill ZIP package
+        run: |
+          SKILL_TMP=$(mktemp -d)
+          cp SKILL.md "${SKILL_TMP}/SKILL.md"
+          cp files/gallery_data.csv "${SKILL_TMP}/gallery_data.csv"
+          cp files/gallery_data_zh.csv "${SKILL_TMP}/gallery_data_zh.csv"
+          cp files/bizard-skill-readme.md "${SKILL_TMP}/README.md"
+          (cd "${SKILL_TMP}" && zip -r - SKILL.md gallery_data.csv gallery_data_zh.csv README.md) > bizard-skill.zip
+          rm -rf "${SKILL_TMP}"
+          echo "✅ Created bizard-skill.zip at project root ($(du -h bizard-skill.zip | cut -f1))"
+
       - name: Render website with Babelquarto
         env:
           TMPDIR: ${{ env.TMP_DIR }}
diff --git a/.github/workflows/quarto-publish.yml b/.github/workflows/quarto-publish.yml
index 6ddaf382f3..50ba92ca59 100644
--- a/.github/workflows/quarto-publish.yml
+++ b/.github/workflows/quarto-publish.yml
@@ -440,27 +440,31 @@ jobs:
           TOTAL_FROZEN=$(find _freeze -name "*.json" -type f 2>/dev/null | wc -l)
           echo "❄️  Freeze cache now has $TOTAL_FROZEN frozen output(s) (JSON entries)"
 
-      - name: Render website with Babelquarto
-        env:
-          TMPDIR: ${{ env.TMP_DIR }}
-          TMP: ${{ env.TMP_DIR }}
-          TEMP: ${{ env.TMP_DIR }}
-          R_COMPILE_PKGS: 0
-          QUARTO_JULIA_PROJECT: ${{ env.QUARTO_JULIA_PROJECT }}
-        run: Rscript -e 'babelquarto::render_website()'
-
+      # ── Generate skill ZIP ───────────────────────────────────
+      # Must run BEFORE babelquarto so the zip exists at project root when
+      # babelquarto copies the project to its temp dir for rendering.
+      # Quarto then copies it to _site/ via the resources entry in _quarto.yml,
+      # ensuring quarto publish gh-pages reliably includes it.
       - name: Generate unified skill ZIP package
         run: |
-          mkdir -p _site/
-          # Stage files with correct names for the zip
+          # Stage files with correct names inside the zip
           SKILL_TMP=$(mktemp -d)
           cp SKILL.md "${SKILL_TMP}/SKILL.md"
           cp files/gallery_data.csv "${SKILL_TMP}/gallery_data.csv"
           cp files/gallery_data_zh.csv "${SKILL_TMP}/gallery_data_zh.csv"
           cp files/bizard-skill-readme.md "${SKILL_TMP}/README.md"
-          (cd "${SKILL_TMP}" && zip -r - SKILL.md gallery_data.csv gallery_data_zh.csv README.md) > _site/bizard-skill.zip
+          (cd "${SKILL_TMP}" && zip -r - SKILL.md gallery_data.csv gallery_data_zh.csv README.md) > bizard-skill.zip
           rm -rf "${SKILL_TMP}"
-          echo "✅ Created _site/bizard-skill.zip ($(du -h _site/bizard-skill.zip | cut -f1))"
+          echo "✅ Created bizard-skill.zip at project root ($(du -h bizard-skill.zip | cut -f1))"
+
+      - name: Render website with Babelquarto
+        env:
+          TMPDIR: ${{ env.TMP_DIR }}
+          TMP: ${{ env.TMP_DIR }}
+          TEMP: ${{ env.TMP_DIR }}
+          R_COMPILE_PKGS: 0
+          QUARTO_JULIA_PROJECT: ${{ env.QUARTO_JULIA_PROJECT }}
+        run: Rscript -e 'babelquarto::render_website()'
 
       # ── Save freeze cache (ALWAYS – even on failure) ─────────
       # This is the key to reducing wasted work across consecutive
diff --git a/.gitignore b/.gitignore
index 541621add0..4d5f2475e0 100644
--- a/.gitignore
+++ b/.gitignore
@@ -26,3 +26,6 @@ skills/**/*_skill.md
 
 # Entire skills/ directory (superseded by SKILL.md)
 skills/
+
+# Generated skill ZIP (built by CI from SKILL.md + CSV files; deployed to _site/ via resources)
+bizard-skill.zip
diff --git a/_quarto.yml b/_quarto.yml
index 0f462252eb..2a37538e21 100644
--- a/_quarto.yml
+++ b/_quarto.yml
@@ -10,6 +10,7 @@ project:
   resources:
     - "files/*.csv"
     - "files/*.json"
+    - "bizard-skill.zip"
 
 execute:
   freeze: auto  # never re-render during project render