From 4eddc0c50dcef71c047d0ccdba977683d08a29f4 Mon Sep 17 00:00:00 2001 From: Farid Zare Date: Mon, 17 Feb 2025 12:36:23 +0000 Subject: [PATCH 1/2] Update testCycleFreeFlux.m --- test/verifiedTests/analysis/testThermo/testCycleFreeFlux.m | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/test/verifiedTests/analysis/testThermo/testCycleFreeFlux.m b/test/verifiedTests/analysis/testThermo/testCycleFreeFlux.m index 0cebf81a18..d4de7cfc1b 100644 --- a/test/verifiedTests/analysis/testThermo/testCycleFreeFlux.m +++ b/test/verifiedTests/analysis/testThermo/testCycleFreeFlux.m @@ -16,7 +16,7 @@ % linprog does not seem to work properly on this problem... % quadMinos and dqqMinos seem to have problems with this rproblem too, % leading to suboptimal solutions. -solverPkgs = prepareTest('needsLP', true, 'excludeSolvers',{'matlab','dqqMinos','quadMinos','pdco', 'ibm_cplex'}); +solverPkgs = prepareTest('needsLP', true, 'needsQP', true, 'excludeSolvers',{'matlab','dqqMinos','quadMinos','pdco', 'ibm_cplex'}); % save the current path currentDir = pwd; From a417c0321095c4159301da2e8eebd2e1753710de Mon Sep 17 00:00:00 2001 From: Farid Zare Date: Mon, 17 Feb 2025 13:03:08 +0000 Subject: [PATCH 2/2] Update testSampleCbModelRHMC.m --- .../analysis/testSampling/testSampleCbModelRHMC.m | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/test/verifiedTests/analysis/testSampling/testSampleCbModelRHMC.m b/test/verifiedTests/analysis/testSampling/testSampleCbModelRHMC.m index 1193e6c687..9c14c3e7a9 100644 --- a/test/verifiedTests/analysis/testSampling/testSampleCbModelRHMC.m +++ b/test/verifiedTests/analysis/testSampling/testSampleCbModelRHMC.m @@ -5,12 +5,14 @@ % % initialize the test +solverPkgs = prepareTest('requiredToolboxes', {'statistics_toolbox'}); + fileDir = fileparts(which('testSampleCbModelRHMC')); models = {}; models{1} = getDistributedModel('ecoli_core_model.mat'); models{2} = getDistributedModel('Acidaminococcus_sp_D21.mat'); -% load('Recon1.0model.mat', 'Recon1') -% models{3} = Recon1; +load('Recon1.0model.mat', 'Recon1') +models{3} = Recon1; try S = load('iDopaNeuro1.mat'); names = fieldnames(S);