python wrapper

[CPernet]

input: folder
output: - modalities
- total number of files per modality
- % files ignored

is it possible to distinguish ignored files which part of the spec from those not part of the spec?

[bendhouseart]

You know the tool will only be as good as the source data :)

As you've mentioned in the readme running the validator and/or pybids on a bids dataset, then re-running it over any files present in the .bidsignore seems like a good first step. Co-opting an existing converter that does much of this work might be the fastest way forward after that as many of them index their given input folders.

[bendhouseart]

An alternative might be to write additional schema and feed it into the validator for BIDS-like data.