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lines changed Original file line number Diff line number Diff line change @@ -38,7 +38,8 @@ This software can be installed via source or via pip from PyPi with `pip install
3838usage: petdeface.py [-h] [--output_dir OUTPUT_DIR] [--anat_only]
3939 [--subject SUBJECT] [--session SESSION] [--docker]
4040 [--n_procs N_PROCS] [--skip_bids_validator] [--version]
41- [--placement PLACEMENT] [--remove_existing] input_dir
41+ [--placement PLACEMENT] [--remove_existing] [--excludesubject]
42+ input_dir
4243
4344PetDeface
4445
@@ -65,6 +66,8 @@ options:
6566 w/ defaced at input_dir
6667 ' derivatives' : does all of the defacing within the derivatives folder in input_dir.
6768 --remove_existing, -r Remove existing output files in output_dir.
69+ --excludesubject EXCLUDESUBJECT [EXCLUDESUBJECT ...]
70+ Exclude a subject(s) from the defacing workflow. e.g. --excludesubject sub-01 sub-02
6871```
6972
7073Working example usage:
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