Update QC report; minor bugfixes for workflow #65
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…in run (#63) * use niivue to dynamically render report with rotating heads * serve nifti's to niivue over http * scan niivue preview added to full report * generating svg's for comparison w/ good ole nipype * add entrypoint for qa reports * standardize commands * refactored from defaced dir to bids dir to make qa usage more clear * clean up toml and fix import
* serving from across the host file system * comparison works for sure * scan niivue preview added to full report * update avg and warp to occur during main pipeline * generating svg's for comparison w/ good ole nipype * renamed svg outputs * rotating heads are back * add entrypoint for qa reports * standardize commands * refactored from defaced dir to bids dir to make qa usage more clear * clean up toml and fix import * Add missing --use_template_anat argument to fix AttributeError * add badge to readme
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…in run (#63)
📚 Documentation preview 📚: https://petdeface--65.org.readthedocs.build/en/65/