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Fix runs and update to uv #5

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Fix runs and update to uv #5

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a3f358a
update to uv and add test for multirunpet
bendhouseart Nov 25, 2025
af8a31e
update tests to account for multiple runs in all cases
bendhouseart Nov 25, 2025
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2 changes: 1 addition & 1 deletion petutils/petutils.py
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Original file line number Diff line number Diff line change
Expand Up @@ -93,7 +93,7 @@ def collect_anat_and_pet(bids_data: Union[pathlib.Path, BIDSLayout], suffixes=["
mapped_pet_to_anat[subject] = {}
for subject in subjects:
pet_files = bids_data.get(subject=subject, suffix="pet")
anat_files = [a.path for a in bids_data.get("anat",suffix=suffixes, subject=subject, extension=["nii", "nii.gz"])]
anat_files = [a.path for a in bids_data.get(suffix=suffixes, subject=subject, extension=["nii", "nii.gz"])]
# for each pet image file we create an entry our mapping dictionary
for entry in pet_files:
if type(entry) is BIDSImageFile:
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