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workflows/single_cell/parallel_integration: Add a workflow that runs multiple integration methods (harmony, scvi, scanorama, bbknn) in parallel on a preprocessed h5mu and merges each method's annotations into a single output (PR #15). -
dataflow/move_anndata_slots: Add a component that moves selected slots (.obs,.var,.obsm,.varm,.obsp,.varp,.uns) from a modality in a source MuData file into a modality in a target MuData file (PR #15).
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workflows/single_cell/process_integrate_annotate: Set scope toprivate(PR #6). -
Bump
openpipelinedependency version tov4.0.4(PR #9). -
Bump
viashversion to0.9.7(PR #10).
- Add a README (PR #4).
Initial release containing a single-cell meta-workflow to process single cell omics samples, perform batch integration and/or label projection.