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openpipeline_qc 0.2.2

BUG FIX

  • src/ingestion_qc/h5mu_to_qc_json: Use float32 instead of float16 for CosMx staining metrics to prevent overflow to infinity (PR #17).

openpipeline_qc 0.2.0

NEW FEATURES

  • Add support for CosMx data in the QC Reporting workflow (PR #12).

MINOR CHANGES

  • Added support for Visium data ingestion and QC reporting (PR #16).

openpipeline_qc 0.2.0

MINOR CHANGES

  • src/workflows/generate_qc_report: Add min and max constraints to --max_samples_per_report, to limit the number of samples per report between 1 and 20 (PR #11).

  • Update openpipeline dependency to v4.0.0 and siqc to version v0.2.0 (PR #15).

openpipeline_qc 0.1.1

MINOR CHANGES

  • Add a README (PR #9).

openpipeline_qc 0.1.0

Initial release containing a QC Reporting workflow for Xenium or CellRanger Multi ingested data, with corresponding components.