BC Centre for Disease Control Public Health Laboratory

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30 packages

snippy-nf
Published Aug 26, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/snippy-variants

175
auspice
Published Aug 26, 2024 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/auspice-docker

152
routine-assembly
Published Apr 24, 2024 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/routine-assembly

82
basic-sequence-qc
Published Jul 18, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/basic-sequence-qc

71
downsample-reads
Published Mar 5, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/downsample-reads

57
routine-assembly-bakta
Published Apr 24, 2024 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/routine-assembly

51
mlst-nf
Published Mar 5, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/mlst-nf

49
snippy-core-phylogenomics
Published Aug 26, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/snippy-core-phylogenomics

36
artic-rsvb-illumina
Published May 30, 2025 by BC Centre for Disease Control Public Health Laboratory

35
artic-rsva-illumina
Published May 30, 2025 by BC Centre for Disease Control Public Health Laboratory

34
plasmid-assembly-plassembler
Published Apr 15, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/plasmid-assembly

32
determinator
Published Aug 20, 2025 by BC Centre for Disease Control Public Health Laboratory

30
hcv-nf
Published May 28, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/hcv-nf

28
taxon-abundance
Published Mar 12, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/taxon-abundance

26
tbprofiler-nf
Published Aug 26, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/tbprofiler-nf

24
basic-sequence-qc-dehosting
Published Jul 18, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/basic-sequence-qc

24
hcv-r
Published May 28, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/hcv-nf

23
artic-rsvb-extras
Published May 30, 2025 by BC Centre for Disease Control Public Health Laboratory

19
plasmid-screen
Published Jul 18, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/plasmid-screen

19
artic-rsva-extras
Published May 30, 2025 by BC Centre for Disease Control Public Health Laboratory

18
kma-cgmlst
Published Aug 26, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/kma-cgmlst

17
rsv-b-qc
Published Jul 29, 2025 by BC Centre for Disease Control Public Health Laboratory

16
nf-shovill
Published Jan 29, 2026 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/nf-shovill

16
alignment-variants-plot-coverage
Published Aug 25, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/alignment-variants

15
plasmid-assembly
Published Apr 15, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/plasmid-assembly

15
tbprofiler-nf-snpit
Published Aug 28, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/tbprofiler-nf

14
cgmlst-clustering
Published Aug 25, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/cgmlst-clustering

14
rsv-a-qc
Published Jul 29, 2025 by BC Centre for Disease Control Public Health Laboratory

13
alignment-variants
Published Aug 25, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/alignment-variants

13
hcv-freyja
Published May 28, 2025 by BC Centre for Disease Control Public Health Laboratory in BCCDC-PHL/hcv-nf

12