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    • medlord

      Public
      Python
      Apache License 2.0
      3532Updated Apr 10, 2026Apr 10, 2026
    • wad-div

      Public
      Official implementation of WAD-Div, a feature-space diversity metric for evaluating generative medical image datasets
      Jupyter Notebook
      0000Updated Mar 12, 2026Mar 12, 2026
    • Python
      MIT License
      0010Updated Feb 3, 2026Feb 3, 2026
    • Jupyter Notebook
      MIT License
      1200Updated Sep 5, 2025Sep 5, 2025
    • highdicom

      Public
      High-level DICOM abstractions for the Python programming language
      Python
      MIT License
      52000Updated Sep 3, 2025Sep 3, 2025
    • ViTiMM

      Public
      Vision Transformer for irregular sampled Multi-modal Measurements (ViTiMM)
      Jupyter Notebook
      0000Updated Aug 5, 2025Aug 5, 2025
    • Jupyter Notebook
      Other
      0200Updated Jul 17, 2025Jul 17, 2025
    • FUNAvg

      Public
      Tölle et al. (2024). FUNAvg: Federated Uncertainty Weighted Averaging for Datasets with Diverse Labels. MICCAI.
      Jupyter Notebook
      1410Updated May 8, 2025May 8, 2025
    • fedbiomed

      Public
      A collaborative learning framework for empowering biomedical research
      Python
      Other
      16000Updated Mar 25, 2025Mar 25, 2025
    • Jupyter Notebook
      2700Updated Feb 17, 2025Feb 17, 2025
    • A dashboard to visualise federated training
      Python
      0000Updated Feb 16, 2025Feb 16, 2025
    • Jupyter Notebook
      GNU General Public License v3.0
      1310Updated Jan 8, 2025Jan 8, 2025
    • Python
      MIT License
      1100Updated Nov 29, 2024Nov 29, 2024
    • Visualization of dataset splits for surgical phase and instrument recognition
      TypeScript
      MIT License
      0810Updated Jun 5, 2024Jun 5, 2024
    • Python
      GNU General Public License v3.0
      0000Updated Feb 5, 2024Feb 5, 2024
    • kaapana

      Public
      Kaapana (from the hawaiian word kaʻāpana, meaning “distributor” or “part”) is an open source toolkit for state of the art platform provisioning in the field of …
      Python
      GNU Affero General Public License v3.0
      64100Updated Aug 22, 2023Aug 22, 2023
    • Jupyter Notebook
      0000Updated Jun 12, 2023Jun 12, 2023
    • Self-supervised method for cardiac phase detection in 4D CMR. Model consists of a deformable registration part, the derivation of the per-voxel deformation angl…
      Jupyter Notebook
      GNU General Public License v3.0
      3400Updated May 30, 2023May 30, 2023
    • mvhota

      Public
      A multi-view higher order tracking accuracy metric to measure temporal and spatial associations in multi-point tracking
      Python
      1100Updated Jan 27, 2023Jan 27, 2023
    • Mutually improved endoscopic image synthesis and landmark detection in unpaired image to image translation Sharan et al. 2021, IEEE JBHI
      Python
      GNU General Public License v3.0
      0100Updated Oct 7, 2022Oct 7, 2022
    • Semantic Segmentation of CMR with a U-Net based architecture. Implemented in TF2.X. Trainings, prediction and evaluation scripts/notebooks for heatmap based rig…
      Jupyter Notebook
      MIT License
      3800Updated Sep 26, 2022Sep 26, 2022
    • CADP

      Public
      Jupyter Notebook
      MIT License
      0000Updated Sep 20, 2022Sep 20, 2022
    • A docker example repository to support participants in creating submissions for the AdaptOR2022 MICCAI Challenge https://www.synapse.org/AdaptOR_Challenge_2022_…
      Python
      3200Updated May 9, 2022May 9, 2022
    • Point detection through multi-instance deep heatmap regression for sutures in endoscopy, Sharan et al. 2021, IJCARS
      Python
      GNU General Public License v3.0
      1400Updated Feb 3, 2022Feb 3, 2022
    • Jupyter Notebook
      MIT License
      0000Updated Jan 17, 2022Jan 17, 2022
    • Posterior temperature optimized Bayesian models for inverse problems in medical imaging, Laves et al. (2022), Medical Image Analysis
      Jupyter Notebook
      1710Updated Aug 24, 2021Aug 24, 2021
    • Unsupervised Domain Adaptation (AX2SAX) for CMR images, Koehler et al. 2021, IEEE TMI
      Jupyter Notebook
      MIT License
      3600Updated Feb 1, 2021Feb 1, 2021
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