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    55 repositories

    • GRASP

      Public
      Python
      •0•0•0•0•Updated Feb 25, 2026Feb 25, 2026

    • PSGRN

      Public
      Python
      •
      MIT License
      •0•1•1•0•Updated Feb 25, 2026Feb 25, 2026

    • sensorium-viz

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jul 1, 2025Jul 1, 2025

    • DDR-Drug-Synergy-Prediction

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Apr 17, 2025Apr 17, 2025

    • ImageDoubler

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Nov 4, 2024Nov 4, 2024

    • For_new_lab_members

      Public
      Startup settings for new lab members
      0•0•0•0•Updated Oct 10, 2024Oct 10, 2024

    • DrugComb-cross-study-prediction

      Public
      machine learning models for cross-study combination response prediction
      Jupyter Notebook
      •0•7•1•0•Updated Mar 21, 2024Mar 21, 2024

    • Sensorium2022_Challenge

      Public
      The winning solution for the SENSORIUM 2022 Challenge
      Jupyter Notebook
      •1•0•0•0•Updated Jan 3, 2024Jan 3, 2024

    • DDR_combination_analysis

      Public
      Statistical analysis of DDR combination response
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 28, 2023Aug 28, 2023

    • CausalBench2023_Challenge

      Public
      The winning solution of the CausalBench 2023 Challenge
      Python
      •
      MIT License
      •0•2•0•0•Updated May 28, 2023May 28, 2023

    • CODA_TB_DREAM_Challenge

      Public
      Code to CODA TB DREAM Challenge
      Python
      •0•0•0•0•Updated Mar 9, 2023Mar 9, 2023

    • DDR-drug-synergy-prediction-ShinyApp

      Public
      Shiny app for DDR drug synergy prediction based on molecular context
      HTML
      •
      Other
      •0•0•0•0•Updated Feb 23, 2023Feb 23, 2023

    • ciclops

      Public
      Pipeline for building clinical outcome prediction models on training dataset and transfer learning on validation datasets.
      Python
      •
      MIT License
      •1•0•0•0•Updated Aug 29, 2022Aug 29, 2022

    • Ocelot

      Public
      Python
      •
      MIT License
      •1•5•0•0•Updated Feb 16, 2022Feb 16, 2022

    • Mandora

      Public
      Python
      •0•2•0•0•Updated Feb 11, 2022Feb 11, 2022

    • Predict-Malaria-ART-Resistance

      Public
      Winning algorithm in 2019 Malaria DREAM Challenge Subchallenge 2
      Python
      •0•0•0•0•Updated Jan 10, 2022Jan 10, 2022

    • Sleep-Stage-Auto-annotation

      Public
      Python
      •
      MIT License
      •2•6•0•0•Updated Dec 2, 2021Dec 2, 2021

    • DeepSleep

      Public
      Python
      •
      Other
      •16•43•2•0•Updated Nov 12, 2021Nov 12, 2021

    • ENCODE_imputation

      Public
      Python
      •1•1•0•0•Updated Oct 7, 2021Oct 7, 2021

    • Leopard

      Public
      Python
      •5•17•5•0•Updated Sep 16, 2021Sep 16, 2021

    • timesias

      Public
      Predict outcomes from time-series data
      HTML
      •
      MIT License
      •1•6•0•0•Updated Sep 13, 2021Sep 13, 2021

    • FastClone_GuanLab

      Public
      Python
      •
      GNU General Public License v3.0
      •5•16•1•0•Updated Aug 11, 2021Aug 11, 2021

    • GuanRank_All

      Public
      Application examples of GuanRank in deep learning (images), lightGBM and recurrent neural networks (time-series)
      Roff
      •2•4•0•0•Updated May 12, 2021May 12, 2021

    • PDTap

      Public
      Python
      •1•1•0•0•Updated May 6, 2021May 6, 2021

    • TAIJI

      Public
      TAIJI: Approaching Experimental Replicates-Level Accuracy for Drug Synergy Prediction --Yuanfang's DREAM Drug Synergy Winning Algorithm
      Perl
      •0•3•0•0•Updated Apr 18, 2021Apr 18, 2021

    • sepsis

      Public
      Top-performing algorithm for DII National Data Science Challenge
      HTML
      •
      MIT License
      •1•5•0•0•Updated Mar 20, 2021Mar 20, 2021

    • Cell-Linage-Reconstruction

      Public
      2019 DREAM Lineage Reconstruction Challenge
      Python
      •1•0•0•0•Updated Mar 10, 2021Mar 10, 2021

    • COVID-19

      Public
      Python
      •0•0•0•0•Updated Nov 17, 2020Nov 17, 2020

    • Image_based_doublet_detection

      Public
      Python
      •0•1•0•0•Updated Oct 16, 2020Oct 16, 2020

    • Sequence_Analysis_for_TF-co-binding

      Public
      Perl
      •1•2•0•0•Updated Oct 16, 2020Oct 16, 2020
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