ARAMIS Lab

All

49 repositories

leaspy
Public
LEArning Spatiotemporal Patterns in Python
Python
•
BSD 3-Clause "New" or "Revised" License
•9•20•55•1•Updated Oct 30, 2025Oct 30, 2025
clinica-pydra-freesurfer
Public
Pydra tasks for FreeSurfer designed for Clinica
neuroimaging freesurfer pydra
Python
•
Apache License 2.0
•1•5•0•5•Updated Oct 27, 2025Oct 27, 2025
pydra-brainstat
Public
Pydra tasks for BrainStat
neuroimaging pydra
Python
•
Apache License 2.0
•0•0•0•5•Updated Oct 27, 2025Oct 27, 2025
clinica-pydra-fsl
Public
Pydra tasks for FSL designed for Clinica
neuroimaging fsl pydra
Python
•
Apache License 2.0
•1•3•0•5•Updated Oct 27, 2025Oct 27, 2025
ReadingGroup
Public
ARAMIS's Reading Group
2•3•0•0•Updated Oct 27, 2025Oct 27, 2025
clinicadl
Public
Framework for the reproducible processing of neuroimaging data with deep learning methods
python deep-learning pytorch medical-imaging neuroimaging convolutional-neural-network brain-imaging alzheimer-disease
Python
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MIT License
•60•174•39•5•Updated Oct 2, 2025Oct 2, 2025
EHR_dementia_prediction_65
Public
Jupyter Notebook
•0•0•0•0•Updated Sep 26, 2025Sep 26, 2025
clinica
Public
Software platform for clinical neuroimaging studies
python machine-learning scikit-learn neuroscience neuroimaging spm fsl ants freesurfer bids-format
Python
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Other
•87•260•76•14•Updated Sep 19, 2025Sep 19, 2025
clinica-pydra-petpvc
Public
Pydra tasks for PETPVC designed for Clinica
neuroimaging partial-volume-correction positron-emission-tomography pydra
Python
•
Apache License 2.0
•0•0•0•2•Updated Sep 8, 2025Sep 8, 2025
clinica-pydra-ants
Public
Pydra tasks for ANTs designed for Clinica
neuroimaging ants pydra
Python
•
Apache License 2.0
•0•0•0•2•Updated Sep 8, 2025Sep 8, 2025
clinicadl-zoo
Public
Community transforms and models for ClinicaDL.
Python
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MIT License
•3•1•0•3•Updated Sep 8, 2025Sep 8, 2025
aramis-lab.github.io
Public
Website of the Aramis team
9•3•7•1•Updated Aug 12, 2025Aug 12, 2025
tuto-doc
Public
Toy library for documentation tutorial (summer 2025)
Python
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MIT License
•7•0•0•1•Updated Jul 17, 2025Jul 17, 2025
clinicadl-website
Public
HTML
•0•0•0•0•Updated Jul 7, 2025Jul 7, 2025
meta-registries-SNDS
Public
HTML
•0•0•0•0•Updated Jun 30, 2025Jun 30, 2025
formation-SED-2025
Public
Jupyter Notebook
•
MIT License
•1•0•1•1•Updated Jun 26, 2025Jun 26, 2025
dev-meetings
Public
Materials for ARAMIS dev meetings.
0•0•0•0•Updated Jun 11, 2025Jun 11, 2025
aramis-beamer-minimalist
Public template
Minimalist beamer template made for Aramis lab’s fellows
TeX
•0•0•0•0•Updated May 27, 2025May 27, 2025
clinicadl-tutorials
Public
Tutorials for ClinicaDL.
Jupyter Notebook
•
MIT License
•3•2•0•0•Updated Apr 16, 2025Apr 16, 2025
miccai2022-stratifiad
Public
Python
•
MIT License
•1•3•1•0•Updated Feb 18, 2025Feb 18, 2025
clinicaio
Public
Python library for input/output management of all Clinica projects.
Python
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MIT License
•3•1•2•2•Updated Dec 2, 2024Dec 2, 2024
anomdetect_diffusion
Public
0•0•0•0•Updated Nov 18, 2024Nov 18, 2024
MOOD_2024_public
Public
Python
•0•0•0•0•Updated Aug 23, 2024Aug 23, 2024
clinicadl_handbook
Public
Tutorial to use (new version of) clinicadl (>1.0.3)
learning deep neuroimaging
Jupyter Notebook
•
Creative Commons Zero v1.0 Universal
•7•2•5•1•Updated Jun 4, 2024Jun 4, 2024
pydra-spm
Public archive
Pydra tasks for SPM
python neuroimaging spm pydra
Python
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Apache License 2.0
•1•0•0•0•Updated Apr 2, 2024Apr 2, 2024
pydra-bids
Public archive
Pydra tasks for BIDS I/O
neuroimaging bids pydra
Python
•
Apache License 2.0
•1•2•0•1•Updated Apr 2, 2024Apr 2, 2024
pydra-dcm2bids
Public archive
Pydra tasks for dcm2bids
dicom bids pydra
Python
•
Apache License 2.0
•0•1•0•0•Updated Apr 1, 2024Apr 1, 2024
dataset-registry
Public
Public dataset registry for dvc
0•0•0•0•Updated Nov 29, 2023Nov 29, 2023
NOW-2023
Public
Repository for the 2023 NeuroScience Open Workshop
Jupyter Notebook
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MIT License
•1•1•0•0•Updated Nov 24, 2023Nov 24, 2023
NOW-2023-lib
Public
Library to be used for NOW 2023 workshop
Python
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MIT License
•0•0•0•0•Updated Nov 20, 2023Nov 20, 2023