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@atsa-es Applied Time Series Analysis

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    30 repositories

    • MARSS

      Public
      Multivariate Autoregressive State-Space Modeling with R
      cranstatisticstime-seriesr-packagemultivariate-timeseriesstate-space-models
      R
      •
      GNU General Public License v3.0
      •27•54•34•0•Updated Sep 9, 2025Sep 9, 2025

    • atsa

      Public
      Applied Time Series Analysis - course website repository.
      statisticstime-seriesecological-modelling
      HTML
      •
      Other
      •9•19•10•1•Updated Jun 3, 2025Jun 3, 2025

    • fish550-2025

      Public
      GitHub Repo for FISH 550 2025
      HTML
      •0•2•0•0•Updated May 31, 2025May 31, 2025

    • atsalibrary

      Public
      Data, scripts and packages for ATSA course and book. Students should install this before running examples in the lab book.
      HTML
      •5•3•0•0•Updated Apr 26, 2025Apr 26, 2025

    • mvdlm

      Public
      Multivariate dynamic linear models using Bayesian methods in Stan
      time-seriesbayesianstanr-packagedlm
      C++
      •1•1•0•0•Updated Apr 22, 2025Apr 22, 2025

    • fish550-2023

      Public template
      GitHub Repo for FISH 550 2023
      HTML
      •1•3•1•0•Updated Mar 22, 2025Mar 22, 2025

    • atsa2023

      Public
      Archived version of the 2023 website
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Jan 15, 2025Jan 15, 2025

    • atsar

      Public
      Applied time series analysis in R with Stan. Allows fast Bayesian fitting of multivariate time-series models.
      time-seriesbayesianstanr-package
      C++
      •16•48•2•0•Updated Jun 11, 2024Jun 11, 2024

    • .github

      Public
      0•0•0•0•Updated Dec 1, 2023Dec 1, 2023

    • atsa-es.r-universe.dev

      Public
      CRAN-like repository for the atsa-es packages. Binaries are available for Windows and MacOS
      0•0•0•0•Updated Nov 1, 2023Nov 1, 2023

    • test-3

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Oct 19, 2023Oct 19, 2023

    • MAR1

      Public
      MAR1 Estimation
      time-seriesr-packagemultivariate-timeseries
      R
      •0•1•1•0•Updated Jun 7, 2023Jun 7, 2023

    • marssTMB

      Public
      Companion package for MARSS that allows you to use TMB to fit MARSS models
      time-seriesr-packagetmbmultivariate-timeseriesstate-space-modelmarss
      HTML
      •0•1•3•0•Updated May 23, 2023May 23, 2023

    • pdfsizeopt-readme

      Public
      PDF file size optimizer
      Python
      •
      GNU General Public License v2.0
      •75•0•0•0•Updated May 17, 2023May 17, 2023

    • MARSS-User-Guide

      Public
      The MARSS User Guide. https://cran.r-project.org/package=MARSS
      TeX
      •
      Creative Commons Zero v1.0 Universal
      •1•0•1•0•Updated May 16, 2023May 16, 2023

    • fish550-devcontainer

      Public
      A devcontainer for FISH 550
      Jupyter Notebook
      •
      MIT License
      •0•1•1•0•Updated Mar 18, 2023Mar 18, 2023

    • devcontainers-rstudio

      Public template
      Zero-setup R workshops with GitHub Codespaces
      Jupyter Notebook
      •
      MIT License
      •114•0•0•0•Updated Mar 18, 2023Mar 18, 2023

    • atsa-es.github.io

      Public
      Website repository for Applied Time-Series Analysis for Fisheries and Environmental Data
      CSS
      •1•3•1•0•Updated Nov 29, 2022Nov 29, 2022

    • binder-environment

      Public
      A binder environment for ATSA material. Make sure to read the wiki (tab to left) to read about my pain points.
      R
      •1•0•0•0•Updated Oct 19, 2022Oct 19, 2022

    • varlasso

      Public
      Repo for fitting Bayesian VAR models with shrinkage on coefficient estimates
      time-seriesbayesianr-packagemultivariate-timeseries
      C++
      •3•2•0•0•Updated Sep 29, 2022Sep 29, 2022

    • MARSS-pkgdown

      Public
      Multivariate Autoregressive State-Space Modeling with R
      R
      •
      Other
      •27•0•0•0•Updated May 26, 2022May 26, 2022

    • MARSS2

      Public
      Multivariate Autoregressive State-Space Modeling with R
      R
      •
      Other
      •0•0•0•0•Updated Dec 15, 2021Dec 15, 2021

    • atsa-labs

      Public
      Labs developed for Applied Fisheries Time-series Analysis course. The link for the text is https://atsa-es.github.io/atsa-labs/
      HTML
      •
      Other
      •18•22•4•0•Updated Dec 7, 2021Dec 7, 2021

    • tvvarss

      Public
      Time varying vector autoregressive state space modeling of community interactions in a Bayesian framework
      time-seriesstate-spacebayesianr-packagemultivariate-timeseries
      C++
      •6•12•2•0•Updated Oct 4, 2021Oct 4, 2021

    • org-level-todo

      Public
      Just for keeping track of issues at the org level
      0•0•4•0•Updated Sep 24, 2021Sep 24, 2021

    • safs-timeseries

      Public
      Repository for miscellaneous code and data used in FISH 550 (Applied Time Series Analysis) at University of Washington
      R
      •3•9•0•0•Updated Sep 24, 2021Sep 24, 2021

    • atsa2021

      Public
      Applied Time Series Analysis - 2021 course website repository.
      HTML
      •
      Other
      •1•1•1•0•Updated May 7, 2021May 7, 2021

    • atsa2019

      Public
      Applied Time Series Analysis - 2019 course website repository.
      HTML
      •0•0•0•0•Updated Dec 18, 2020Dec 18, 2020

    • atsa2017

      Public
      Fish 507 Applied Time Series Analysis 2017
      HTML
      •2•3•0•0•Updated May 9, 2019May 9, 2019

    • MARSS-wiki

      Public
      TeX
      •0•0•0•0•Updated Oct 2, 2018Oct 2, 2018