Repositories list

• cbioportal

  Public
  cBioPortal for Cancer Genomics

  visualizationsciencecancer-genomics+ 1

  visualizationsciencecancer-genomicsprecision-medicine

  Java

  •

  GNU Affero General Public License v3.0

  •860860 forks•1k1k stars•328328 issues•3838 pull requests•Updated Jun 19, 2026Jun 19, 2026

• cbioportal-frontend

  Public
  React Frontend of cBioPortal :tada:

  reactmobxcancer-genomics

  reactmobxcancer-genomics

  TypeScript

  •

  GNU Affero General Public License v3.0

  •426426 forks•144144 stars•00 issues•7272 pull requests•Updated Jun 19, 2026Jun 19, 2026

• datahub

  Public
  A centralized location for storing curated data from cBioPortal

  HTML

  •143143 forks•213213 stars•129129 issues•2323 pull requests•Updated Jun 18, 2026Jun 18, 2026

• cbioportal-mcp

  Public
  Python

  •1010 forks•99 stars•2222 issues•77 pull requests•Updated Jun 17, 2026Jun 17, 2026

• cbioportal-assistant-api

  Public
  Standalone chat API microservice for the cBioPortal AI assistant.

  TypeScript

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jun 17, 2026Jun 17, 2026

• cbioportal-mcp-qa

  Public
  Python

  •22 forks•33 stars•44 issues•33 pull requests•Updated Jun 17, 2026Jun 17, 2026

• LibreChat

  Public
  Enhanced ChatGPT Clone: Features Agents, MCP, DeepSeek, Anthropic, AWS, OpenAI, Responses API, Azure, Groq, o1, GPT-5, Mistral, OpenRouter, Vertex AI, Gemini, A…

  TypeScript

  •

  MIT License

  •8.1k8.1k forks•00 stars•00 issues•33 pull requests•Updated Jun 17, 2026Jun 17, 2026

• cbioportal-navigator

  Public
  MCP server for natural language user query -> cBioPortal URL

  TypeScript

  •33 forks•33 stars•1414 issues•00 pull requests•Updated Jun 13, 2026Jun 13, 2026

• cbioportal-core

  Public
  Externalized cBioPortal Core

  Java

  •3131 forks•44 stars•2626 issues•2323 pull requests•Updated Jun 8, 2026Jun 8, 2026

• cell-explorer-py

  Public
  Python

  •

  MIT License

  •00 forks•11 star•1212 issues•11 pull request•Updated Jun 4, 2026Jun 4, 2026

• datahub-study-curation-tools

  Public
  Contains tools used by cBioPortal data curators when preparing data for upload into the datahub repos.

  HTML

  •

  GNU Affero General Public License v3.0

  •2121 forks•2222 stars•22 issues•55 pull requests•Updated Jun 1, 2026Jun 1, 2026

• cbioportal-cell-explorer

  Public
  TypeScript

  •

  MIT License

  •22 forks•11 star•1919 issues•1111 pull requests•Updated May 28, 2026May 28, 2026

• cbioportal-docker-compose

  Public
  Run cBioPortal using Docker Compose

  Shell

  •6060 forks•2222 stars•77 issues•55 pull requests•Updated May 26, 2026May 26, 2026

• oncotree

  Public
  Go

  •

  Creative Commons Attribution 4.0 International

  •3232 forks•5151 stars•3131 issues•1616 pull requests•Updated May 26, 2026May 26, 2026

• ai_curation_assistant

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated May 14, 2026May 14, 2026

• cancerhotspots

  Public
  Cancer Hotspots

  JavaScript

  •

  GNU Affero General Public License v3.0

  •1010 forks•88 stars•55 issues•22 pull requests•Updated Apr 21, 2026Apr 21, 2026

• cbioportal-publisher

  Public
  Auto publish cBioPortal modules

  33 forks•00 stars•00 issues•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• cbioportal-test

  Public
  Tests for cBioPortal.

  HTML

  •

  MIT License

  •22 forks•00 stars•00 issues•11 pull request•Updated Apr 11, 2026Apr 11, 2026

• seed_db_test

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Apr 8, 2026Apr 8, 2026

• GSoC

  Public
  Documentation repository of Google Summer of Code (GSoC) project ideas for cBioPortal and related projects

  6464 forks•198198 stars•3232 issues•11 pull request•Updated Mar 20, 2026Mar 20, 2026

• maf

  Public
  Utility classes for the Mutation Annotation Format (MAF)

  Java

  •00 forks•00 stars•00 issues•11 pull request•Updated Mar 18, 2026Mar 18, 2026

• installation-map

  Public
  cBioPortal Installation Map

  TypeScript

  •44 forks•00 stars•00 issues•00 pull requests•Updated Mar 1, 2026Mar 1, 2026

• clinical-data-dictionary

  Public
  Clinical Attribute Web Service for retrieving clinical attribute names and metadata.

  Java

  •99 forks•66 stars•44 issues•44 pull requests•Updated Feb 25, 2026Feb 25, 2026

• cbioportal-vitessce-proxy

  Public
  TypeScript

  •11 fork•00 stars•22 issues•11 pull request•Updated Feb 3, 2026Feb 3, 2026

• project-work-planning

  Public
  A public repository for workflow management

  00 forks•00 stars•2323 issues•00 pull requests•Updated Jan 15, 2026Jan 15, 2026

• cbioportal-helm

  Public
  Helm charts for cBioPortal Kubernetes Deployment

  11 fork•00 stars•22 issues•00 pull requests•Updated Jan 7, 2026Jan 7, 2026

• .github

  Public
  README for cBioPortal Org Page

  22 forks•00 stars•00 issues•11 pull request•Updated Dec 29, 2025Dec 29, 2025

• cbioportal-article-classification

  Public
  Tool for fetching, classifying, and analyzing papers that cite cBioPortal

  Python

  •00 forks•33 stars•00 issues•00 pull requests•Updated Dec 20, 2025Dec 20, 2025

• msk-ecosystems-validator

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 21, 2025Nov 21, 2025

• clickhouse-only-importer-prototype

  Public
  Go

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 5, 2025Nov 5, 2025