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    92 repositories

    • datajoint-python

      Public
      Relational Workflows: where database schemas define executable data pipelines.
      mysqlpythonpostgresql
      mysqlpythonpostgresqldeclarativedata-engineeringscientific-computingreproducibilitydata-pipelinesworkflow-managementdatajoint
      Python
      •
      Apache License 2.0
      •96•192•10•1•Updated Jun 7, 2026Jun 7, 2026

    • datajoint-docs

      Public
      Landing Page for DataJoint Documentation
      Jupyter Notebook
      •
      Other
      •11•7•0•1•Updated Jun 7, 2026Jun 7, 2026

    • CaImAn

      Public
      Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result v…
      Python
      •
      GNU General Public License v2.0
      •399•0•0•2•Updated May 29, 2026May 29, 2026

    • djlabhub-docker

      Public
      A docker image optimized for deploying to JupyterHub a JupyterLab environment with DataJoint Python.
      Python
      •5•3•6•2•Updated May 19, 2026May 19, 2026

    • mym

      Public
      MySQL API for MATLAB with support for BLOB objects
      C
      •
      Other
      •17•8•6•2•Updated May 15, 2026May 15, 2026

    • datajoint-matlab

      Public
      Relational data pipelines for the science lab
      MATLAB
      •
      MIT License
      •41•42•56•0•Updated May 14, 2026May 14, 2026

    • dj-zarr-codecs

      Public
      DataJoint codecs for Zarr array storage
      Python
      •
      MIT License
      •1•0•0•1•Updated Mar 27, 2026Mar 27, 2026

    • element-interface

      Public
      Common functions for the DataJoint Elements
      Python
      •
      MIT License
      •16•3•5•2•Updated Mar 12, 2026Mar 12, 2026

    • pharus

      Public
      Pharus is a generic REST API server backend for DataJoint pipelines built on top of flask, datajoint, and pyjwt.
      flaskdatajoint
      flaskdatajoint
      Python
      •
      MIT License
      •15•3•17•1•Updated Feb 12, 2026Feb 12, 2026

    • lcms-demo

      Public
      Demo DataJoint pipeline for LC-MS data processing
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 6, 2026Feb 6, 2026

    • element-miniscope

      Public
      DataJoint Element for miniscope calcium imaging analysis with CaImAn
      Jupyter Notebook
      •
      MIT License
      •15•2•2•2•Updated Feb 4, 2026Feb 4, 2026

    • figpack

      Public
      A Python package for creating shareable, interactive, browser-based visualizations
      TypeScript
      •
      Apache License 2.0
      •2•0•0•0•Updated Jan 30, 2026Jan 30, 2026

    • ecephys_spike_sorting

      Public archive
      Modules for processing extracellular electrophysiology data from Neuropixels probes
      Python
      •
      Other
      •106•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • workflow-zstack

      Public archive
      Example DataJoint workflow for volumetric data analysis using BossDB
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • workflow-optogenetics

      Public archive
      Example DataJoint workflow for optogenetics research
      Jupyter Notebook
      •
      MIT License
      •3•1•0•0•Updated Jan 21, 2026Jan 21, 2026

    • sciops-summit-2024

      Public archive
      DataJoint SciOps Summit - Schedule
      1•1•0•0•Updated Jan 21, 2026Jan 21, 2026

    • sciops-workshop

      Public archive
      DataJoint SciOps Workshop
      2•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • compress-ephys

      Public archive
      Compression for array electrophysiology
      1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • otumat

      Public archive
      A suite of maintainer tools and utilities for pip packages.
      Python
      •
      MIT License
      •5•1•4•1•Updated Jan 21, 2026Jan 21, 2026

    • blog

      Public archive
      3•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • djarchive-client

      Public archive
      DataJoint Archive Client
      Python
      •7•0•2•0•Updated Jan 21, 2026Jan 21, 2026

    • datajoint-dashboard

      Public archive
      Developing tool to build a Plotly Dash app for a DataJoint pipeline
      Python
      •4•3•2•1•Updated Jan 21, 2026Jan 21, 2026

    • datajoint-addons

      Public archive
      Addons for datajoint-python
      Python
      •
      GNU Lesser General Public License v3.0
      •1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • datajoint_connection_hub-python

      Public archive
      This is an official DataJoint Python plugin for connection to DJNeuro's hosted instances.
      Python
      •
      MIT License
      •1•1•0•2•Updated Jan 21, 2026Jan 21, 2026

    • dj-python-101

      Public archive
      Reference tutorial notebooks for DataJoint (under active development - October 2019)
      Jupyter Notebook
      •1•2•0•0•Updated Jan 21, 2026Jan 21, 2026

    • GHToolbox

      Public archive
      `ghtb` provides a simple way to manage toolbox installation of open-source MATLAB Community Toolboxes linked to GitHub (via Releases).
      MATLAB
      •
      MIT License
      •1•1•2•0•Updated Jan 21, 2026Jan 21, 2026

    • datajoint-paper

      Public archive
      LaTeX code and figures for the publication submission
      TeX
      •1•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • dj-figpack-codecs

      Public
      DataJoint codec for storing figpack visualizations in schema-addressed OAS
      Python
      •
      Other
      •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

    • dj-photon-codecs

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Jan 17, 2026Jan 17, 2026

    • datajoint-book

      Public
      The DataJoint Book
      Jupyter Notebook
      •
      Other
      •3•0•0•0•Updated Jan 14, 2026Jan 14, 2026
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