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    21 repositories

    • dxda

      Public
      CLI tool to manage the download of large quantities of files from DNAnexus
      Go
      •
      Apache License 2.0
      •9•18•7•2•Updated Dec 2, 2025Dec 2, 2025

    • gsrs-play-dist

      Public
      Build artifacts for deployment of our branch of GSRS
      JavaScript
      •0•0•0•0•Updated Dec 2, 2025Dec 2, 2025

    • dx-toolkit

      Public
      DNAnexus platform client libraries
      Python
      •
      Apache License 2.0
      •90•103•43•38•Updated Dec 2, 2025Dec 2, 2025

    • dxScala

      Public
      Java
      •
      Apache License 2.0
      •0•2•0•0•Updated Nov 24, 2025Nov 24, 2025

    • dxCompiler

      Public
      WDL and CWL compiler for the DNAnexus platform
      compilerwdlcwldnanexus
      Scala
      •
      Apache License 2.0
      •18•34•21•3•Updated Oct 6, 2025Oct 6, 2025

    • dxfuse

      Public
      FUSE filesystem for the DNAnexus storage system
      Go
      •
      Apache License 2.0
      •5•14•2•3•Updated Oct 1, 2025Oct 1, 2025

    • cwlScala

      Public
      Scala
      •
      Apache License 2.0
      •1•4•2•1•Updated Sep 2, 2025Sep 2, 2025

    • wdlTools

      Public
      WDL tools for parsing, type-checking, and more
      Scala
      •
      Apache License 2.0
      •7•27•19•1•Updated Sep 2, 2025Sep 2, 2025

    • terraform-aws-ecs-spacelift-selfhosted

      Public
      Terraform module deploying a Spacelift environment to an ECS cluster
      HCL
      •
      MIT License
      •4•0•0•0•Updated Aug 26, 2025Aug 26, 2025

    • terraform-aws-spacelift-selfhosted

      Public
      Terraform module deploying a basic selfhosted Spacelift infrastructure to AWS
      HCL
      •
      MIT License
      •3•0•0•0•Updated Aug 25, 2025Aug 25, 2025

    • dx-streaming-upload

      Public
      The DNAnexus incremental upload script packaged as an Ansible Role
      Python
      •10•13•4•3•Updated Apr 7, 2025Apr 7, 2025

    • packer-plugin-oracle

      Public
      Packer plugin for Oracle Builder
      Go
      •
      Mozilla Public License 2.0
      •17•0•0•0•Updated Apr 2, 2025Apr 2, 2025

    • BrowserBoxScan

      Public template
      🌀 Browse the web from a web page. Remote browser isolation. For security, privacy and more! By https://dosyago.com
      JavaScript
      •
      Other
      •402•2•0•0•Updated Oct 21, 2024Oct 21, 2024

    • oidc-example-app

      Public
      Example web application to showcase the OIDC flow
      JavaScript
      •1•0•0•0•Updated Aug 7, 2024Aug 7, 2024

    • UKB_RAP

      Public
      Access share reviewed code & Jupyter Notebooks for use on the UK Biobank (UKBB) Research Application Platform. Includes resources from DNAnexus webinars, online trainings and workshops.
      gwaswdlukbiobank
      Jupyter Notebook
      •
      MIT License
      •62•211•1•0•Updated Jul 30, 2024Jul 30, 2024

    • dnanexus-example-applets

      Public
      Tutorials for app(let) developers:
      pythontutorialdnanexus-platformdnanexus-sdk
      Python
      •
      Other
      •13•24•4•3•Updated Jul 16, 2024Jul 16, 2024

    • OpenBio

      Public
      Jupyter Notebook
      •
      MIT License
      •33•97•2•2•Updated Jan 16, 2024Jan 16, 2024

    • dxWDL

      Public
      Workflow Description Language compiler for the DNAnexus platform
      wdlworkflow-description-language
      Java
      •
      Apache License 2.0
      •16•42•6•3•Updated Jun 29, 2023Jun 29, 2023

    • IndexTools

      Public archive
      IndexTools is a toolkit for extremely fast NGS analysis based on index files.
      Python
      •
      MIT License
      •3•17•13•2•Updated Aug 19, 2022Aug 19, 2022

    • igv-js

      Public
      Lightweight html5 version of the Integrative Genomics Viewer
      JavaScript
      •
      MIT License
      •243•0•0•0•Updated Sep 2, 2020Sep 2, 2020

    • docker-promtool

      Public
      Minimal docker image for running the promtool utility for validating prometheus config files.
      Dockerfile
      •
      Apache License 2.0
      •12•29•0•1•Updated May 11, 2020May 11, 2020