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    17 repositories

    • ethopy_package

      Public
      State control system for automated, high-throughput behavioral training based on Python
      Python
      •
      MIT License
      •3•1•1•1•Updated Nov 24, 2025Nov 24, 2025

    • element-array-ephys

      Public
      DataJoint Element for Neuropixels analysis with Kilosort
      Jupyter Notebook
      •
      MIT License
      •41•0•0•1•Updated Nov 24, 2025Nov 24, 2025

    • ethopy_plugins

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

    • Experiments

      Public
      Python
      •0•0•0•0•Updated Oct 9, 2025Oct 9, 2025

    • ethopy_control

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Sep 26, 2025Sep 26, 2025

    • ethopy_analysis

      Public
      A Python package for analyzing and visualizing behavioral data from Ethopy experiments.
      Python
      •
      MIT License
      •3•0•1•1•Updated Sep 8, 2025Sep 8, 2025

    • ethopy_hardware

      Public
      C++
      •
      MIT License
      •3•0•0•1•Updated Aug 4, 2025Aug 4, 2025

    • element-zstack

      Public
      DataJoint Element for volumetric data analysis using Cellpose
      Python
      •
      MIT License
      •8•0•0•0•Updated Jun 19, 2025Jun 19, 2025

    • element-calcium-imaging

      Public
      DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT
      Jupyter Notebook
      •
      MIT License
      •48•0•0•0•Updated Apr 2, 2025Apr 2, 2025

    • EthoPy

      Public
      State control system for automated behavioral training
      Python
      •26•9•4•2•Updated Mar 17, 2025Mar 17, 2025

    • scanreader

      Public
      Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).
      Python
      •
      MIT License
      •16•0•1•0•Updated Feb 18, 2025Feb 18, 2025

    • Kilosort

      Public
      Fast spike sorting with drift correction
      Python
      •
      GNU General Public License v3.0
      •275•0•0•0•Updated Jan 24, 2025Jan 24, 2025

    • EthoPyCore

      Public
      State control system for automated behavioral training
      Python
      •26•0•0•0•Updated May 21, 2024May 21, 2024

    • Bug

      Public
      Python
      •0•0•0•0•Updated Jan 9, 2024Jan 9, 2024

    • python-multitouch

      Public
      Multi-touch pure Python driver for the official 7" touchscreen display.
      Python
      •
      MIT License
      •21•0•0•0•Updated Aug 2, 2021Aug 2, 2021

    • PyMouse_old

      Public
      Jupyter Notebook
      •3•0•0•0•Updated Apr 15, 2020Apr 15, 2020

    • ARHMM

      Public
      MATLAB
      •1•0•0•0•Updated Jun 20, 2019Jun 20, 2019