Repositories list

• midas-data

  Public
  An ontology for MIDAS data types

  Jupyter Notebook

  •33 forks•44 stars•22 issues•00 pull requests•Updated Apr 14, 2026Apr 14, 2026

• covid19-scenario-hub_r19_manuscript

  Public
  Jupyter Notebook

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• rsv-scenario-modeling-hub

  Public
  RSV Scenario Modeling Hub

  R

  •

  MIT License

  •2424 forks•1616 stars•00 issues•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• covid19-scenario-modeling-hub

  Public
  COVID-19 Scenario Modeling Hub

  HTML

  •

  MIT License

  •99 forks•22 stars•00 issues•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• flu-scenario-modeling-hub

  Public
  Flu Scenario Modeling Hub

  R

  •

  MIT License

  •1414 forks•44 stars•00 issues•00 pull requests•Updated Apr 13, 2026Apr 13, 2026

• SMHviz_plot

  Public
  Python librairy for the US Scenario Modeling Hub (SMH) plots

  Python

  •

  MIT License

  •11 fork•11 star•1111 issues•22 pull requests•Updated Apr 10, 2026Apr 10, 2026

• SMHviz_layout

  Public
  Python librairy for the Scenario Modeling Hub (SMH) websites layout pages

  Python

  •

  MIT License

  •00 forks•00 stars•44 issues•11 pull request•Updated Apr 10, 2026Apr 10, 2026

• midas-sv

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 17, 2026Mar 17, 2026

• SMHvalidation

  Public
  R

  •

  Other

  •00 forks•66 stars•22 issues•00 pull requests•Updated Mar 16, 2026Mar 16, 2026

• concept-extraction-reviewer

  Public
  HTML

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 12, 2026Mar 12, 2026

• midas-ontology-graph-rag

  Public
  A Graph RAG framework that assesses how closely a resource aligns with MIDAS by analyzing its relationship to the properties and classes in the MIDAS Ontology.

  Python

  •00 forks•00 stars•11 issue•00 pull requests•Updated Mar 10, 2026Mar 10, 2026

• public-crc-info

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 6, 2026Jan 6, 2026

• smh-to-jsonld

  Public
  Python

  •00 forks•11 star•77 issues•00 pull requests•Updated Nov 5, 2025Nov 5, 2025

• flu-scenario-modeling-hub_resources

  Public
  R

  •33 forks•1111 stars•00 issues•00 pull requests•Updated Aug 14, 2025Aug 14, 2025

• covid19-smh-research

  Public
  COVID-19 Scenario Modeling Hub - Research

  R

  •

  MIT License

  •88 forks•44 stars•00 issues•00 pull requests•Updated Jul 2, 2025Jul 2, 2025

• covid19-scenario-modeling-hub_archive

  Public
  COVID-19 Scenario Modeling Hub

  HTML

  •4545 forks•6767 stars•11 issue•00 pull requests•Updated May 6, 2025May 6, 2025

• flu-scenario-modeling-hub_archive

  Public
  Flu Scenario Modeling Hub

  R

  •2828 forks•1212 stars•00 issues•00 pull requests•Updated Apr 22, 2025Apr 22, 2025

• cryptic-scenario-modeling-hub

  Public
  Pandemic cryptic phase modeling hub

  MIT License

  •00 forks•88 stars•00 issues•00 pull requests•Updated Apr 10, 2025Apr 10, 2025

• example_round-scenariohub

  Public
  R

  •

  MIT License

  •22 forks•00 stars•11 issue•00 pull requests•Updated Mar 25, 2025Mar 25, 2025

• covid19-smh-research_resources

  Public
  COVID-19 Scenario Modeling Hub Research - Resources

  R

  •

  MIT License

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 19, 2025Mar 19, 2025

• tycho_national_incidence

  Public
  JavaScript

  •

  MIT License

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 14, 2025Feb 14, 2025

• midas-visualization-data-zipper

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Nov 18, 2024Nov 18, 2024

• research-clustering

  Public
  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 16, 2024Nov 16, 2024

• midas-discover-webservice

  Public
  A Flask webservice to provide data for midas visualization

  Python

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 16, 2024Nov 16, 2024

• cromwell_flepimop_project

  Public
  Project repository for Cromwell encapsulation of FlepiMoP

  HTML

  •88 forks•00 stars•00 issues•00 pull requests•Updated May 24, 2024May 24, 2024

• cromwell-multi-model-demo

  Public
  This project demonstrates running multiple models using Cromwell, Python or R, and Docker.

  WDL

  •00 forks•11 star•00 issues•00 pull requests•Updated May 21, 2024May 21, 2024

• cromwell-bayesian-model-covid-demo

  Public
  Shell

  •00 forks•00 stars•11 issue•00 pull requests•Updated May 20, 2024May 20, 2024

• cromwell-epispot

  Public
  This project demostrates running Epispot using Cromwell, Python, and Docker.

  Shell

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 20, 2024May 20, 2024

• cromwell-SEIR-basic

  Public
  Shell

  •11 fork•00 stars•00 issues•00 pull requests•Updated Feb 13, 2024Feb 13, 2024

• covid19-scenario-hub_evaluation

  Public
  R

  •

  MIT License

  •11 fork•00 stars•00 issues•00 pull requests•Updated Dec 13, 2023Dec 13, 2023