Open Problems in Single-Cell Analysis

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30 packages

utils/yaml_to_json
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/utils/yaml_to_json

39
datasets/loaders/multimodal/openproblems_neurips2021_bmmc
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/multimodal/openproblems_neurips2021_bmmc

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datasets/loaders/spatial/zenodo_slidetags
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/spatial/zenodo_slidetags

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datasets/loaders/scrnaseq/cellxgene_census_from_source_h5ad
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/scrnaseq/cellxgene_census_from_source_h5ad

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datasets/loaders/multimodal/openproblems_neurips2022_pbmc
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/multimodal/openproblems_neurips2022_pbmc

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datasets/loaders/spatial/zenodo
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/spatial/zenodo

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datasets/loaders/scrnaseq/cellxgene_census
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/scrnaseq/cellxgene_census

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datasets/loaders/multimodal/openproblems_v1_multimodal
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/multimodal/openproblems_v1_multimodal

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datasets/loaders/scrnaseq/openproblems_v1
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/scrnaseq/openproblems_v1

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datasets/loaders/spatial/tenx_visium
Published Oct 31, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/spatial/tenx_visium

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datasets/loaders/zenodo_spatial_slidetags
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/zenodo_spatial_slidetags

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common/process_task_results/get_method_info
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/get_method_info

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common/process_task_results/get_metric_info
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/get_metric_info

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common/process_task_results/get_task_info
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/get_task_info

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common/process_task_results/generate_qc
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/generate_qc

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common/process_task_results/get_results
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/get_results

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common/process_task_results/get_dataset_info
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/get_dataset_info

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common/decompress_gzip
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/decompress_gzip

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common/sync_test_resources
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/sync_test_resources

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datasets/loaders/cellxgene_census_from_source_h5ad
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/cellxgene_census_from_source_h5ad

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datasets/loaders/cellxgene_census
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/cellxgene_census

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common/check_yaml_schema
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/check_yaml_schema

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common/process_task_results/yaml_to_json
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/common/process_task_results/yaml_to_json

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datasets/loaders/openproblems_neurips2021_bmmc
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/openproblems_neurips2021_bmmc

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datasets/loaders/openproblems_neurips2022_pbmc
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/openproblems_neurips2022_pbmc

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batch_integration/methods/scalex_feature
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/batch_integration/methods/scalex_feature

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datasets/loaders/openproblems_v1
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/openproblems_v1

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datasets/loaders/openproblems_v1_multimodal
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/datasets/loaders/openproblems_v1_multimodal

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denoising/methods/magic
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/denoising/methods/magic

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dimensionality_reduction/control_methods/true_features
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems/dimensionality_reduction/control_methods/true_features

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