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    47 repositories

    • ieeg-sleep-clipper

      Public
      MIT License
      •0•0•0•0•Updated Dec 2, 2025Dec 2, 2025

    • scalp_tle_laterality

      Public
      Python
      •1•0•0•0•Updated Oct 16, 2025Oct 16, 2025

    • scalp_lateralization

      Public
      Calculator to lateralize TLE
      JavaScript
      •0•0•0•0•Updated Sep 30, 2025Sep 30, 2025

    • stim-seizures-manuscript

      Public
      Jupyter Notebook
      •
      Creative Commons Zero v1.0 Universal
      •0•2•1•0•Updated Sep 5, 2025Sep 5, 2025

    • Pennsieve-Demo-ICTALS-2025

      Public
      Open-access neuroinformatics for data sharing and analysis at scale.
      Python
      •0•0•0•0•Updated May 31, 2025May 31, 2025

    • 3t_7t

      Public
      Repository for manuscript: Seizure-onset zone lateralization in temporal lobe epilepsy using 7T rs-fMRI: Direct comparison with 3T rs-fMRI
      Jupyter Notebook
      •0•0•0•0•Updated May 17, 2025May 17, 2025

    • CNT-codehub

      Public
      Code repository and pipeline manager for Penn’s Center for Neuroengineering & Therapeutics.
      Python
      •
      GNU General Public License v3.0
      •1•0•0•1•Updated Apr 30, 2025Apr 30, 2025

    • scalp_deep-learning

      Public
      Code repository and pipeline manager for Penn’s Center for Neuroengineering & Therapeutics.
      Python
      •
      GNU General Public License v3.0
      •1•0•0•1•Updated Apr 29, 2025Apr 29, 2025

    • BIDSIFY

      Public
      Package for creating BIDS datasets for a wide variety of epilepsy data.
      Python
      •1•2•0•0•Updated Apr 9, 2025Apr 9, 2025

    • CNT_Preprocessing_Toolkit

      Public
      Toolkit for pre-processing of intracranial EEG data, and an interactive pipeline for pre-processing method evaluation.
      Jupyter Notebook
      •3•2•0•0•Updated Mar 3, 2025Mar 3, 2025

    • emulated_comparative_effectiveness

      Public
      Python
      •0•0•0•0•Updated Jan 9, 2025Jan 9, 2025

    • RNS_Annotation-Pipeline

      Public
      Jupyter Notebook
      •0•1•0•0•Updated Dec 4, 2024Dec 4, 2024

    • IEEG_Spike-Morphology

      Public
      Python
      •0•0•0•0•Updated Nov 20, 2024Nov 20, 2024

    • ieeg-recon

      Public
      IEEG electrode reconstruction: modular pipeline in MATLAB and Python
      Python
      •3•8•2•0•Updated Nov 16, 2024Nov 16, 2024

    • epilepsy_lateralization

      Public
      HTML
      •0•0•0•0•Updated Sep 11, 2024Sep 11, 2024

    • Pattnaik-sleep-atlas

      Public
      Code for normative atlases in sleep
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Sep 9, 2024Sep 9, 2024

    • cnt_tle_laterality

      Public
      MATLAB
      •1•0•0•0•Updated Aug 14, 2024Aug 14, 2024

    • Sixth_Sense

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Jul 28, 2024Jul 28, 2024

    • pennsieve-workflow_bid-validator

      Public
      A simple workflow for Pennsieve to validate bids datasets.
      Dockerfile
      •0•0•0•0•Updated Jul 17, 2024Jul 17, 2024

    • collaborator_repository

      Public
      Repository for sharing code with collaborators
      Python
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Apr 3, 2024Apr 3, 2024

    • RNS_STIM-MORPHOLOGY

      Public
      Analyzing how the functional and structural connectome predict response to repeated therapeutic stimulation.
      MATLAB
      •1•0•0•0•Updated Mar 4, 2024Mar 4, 2024

    • LDA-subfield-atrophy

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 5, 2024Feb 5, 2024

    • multimodal_excitation_inhibition

      Public
      Normative modeling and multimodal correspondence of excitation-inhibition (E:I) ratio
      Python
      •0•0•0•0•Updated Jan 17, 2024Jan 17, 2024

    • fMRI_HUP2BIDS

      Public
      Python Heudiconv Wrapper for HUP fMRI to BIDS format conversion
      Python
      •0•0•0•0•Updated Nov 12, 2023Nov 12, 2023

    • R01_R61_Pipeline

      Public
      Python
      •0•1•0•0•Updated Oct 12, 2023Oct 12, 2023

    • CNT_research_tools

      Public template
      CNT-approved research tools
      MATLAB
      •1•1•1•0•Updated Oct 9, 2023Oct 9, 2023

    • CNT_EEG_TEMPLATE

      Public template
      EEG focused fork of the Penn CNT code repository.
      Python
      •1•0•0•0•Updated Oct 5, 2023Oct 5, 2023

    • DATA-ECO_BIDS-CONVERTER

      Public
      Bids conversion scripts for data collaborations
      Jupyter Notebook
      •0•0•0•0•Updated Aug 17, 2023Aug 17, 2023

    • NLP_Disparities_in_Seizure_Freedom

      Public
      Python
      •1•0•0•0•Updated Aug 15, 2023Aug 15, 2023

    • CNT_IMAGING_TEMPLATE

      Public template
      Python
      •0•0•0•0•Updated Aug 2, 2023Aug 2, 2023