Repositories list

• Rausch-Ludwig-Bentsen-2026

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 8, 2026May 8, 2026

• CELLEX

  Public
  CELLEX (CELL-type EXpression-specificity)

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •1313 forks•4444 stars•99 issues•00 pull requests•Updated Apr 29, 2026Apr 29, 2026

• Rausch-2025

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 29, 2026Mar 29, 2026

• Christensen-2026

  Public
  R

  •00 forks•11 star•00 issues•00 pull requests•Updated Mar 3, 2026Mar 3, 2026

• Petersen-Merrild-2026

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Feb 20, 2026Feb 20, 2026

• DEPICT

  Public
  DEPICT code, instructions and an example

  Java

  •

  GNU General Public License v3.0

  •2323 forks•5757 stars•2222 issues•22 pull requests•Updated Dec 10, 2025Dec 10, 2025

• Ludwig-Coester-Gordian-2025

  Public
  Jupyter Notebook

  •11 fork•00 stars•00 issues•00 pull requests•Updated Oct 27, 2025Oct 27, 2025

• Juozaityte_2025

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Jun 2, 2025Jun 2, 2025

• Brown-2025

  Public
  Analysis script for snRNA-seq of the mediobasal hypothalamus and dorsal vagal complex

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated May 22, 2025May 22, 2025

• Sass-2024

  Public
  R

  •

  GNU General Public License v3.0

  •00 forks•11 star•00 issues•00 pull requests•Updated Sep 27, 2024Sep 27, 2024

• CELLECT

  Public
  CELLECT (CELL-type Expression-specific integration for Complex Traits)

  Python

  •

  GNU General Public License v3.0

  •2525 forks•9999 stars•3434 issues•00 pull requests•Updated Aug 16, 2024Aug 16, 2024

• Aalling-Todorov-Hassan-2025

  Public
  Jupyter Notebook

  •00 forks•00 stars•00 issues•00 pull requests•Updated Jul 4, 2024Jul 4, 2024

• glp1r_leptin

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 4, 2024Apr 4, 2024

• Petersen-Nature-2024

  Public
  00 forks•00 stars•00 issues•00 pull requests•Updated Mar 5, 2024Mar 5, 2024

• Lund-Ranea-Robles-2023

  Public
  Analysis script for Bulk RNA-seq data from hypothalamus

  00 forks•00 stars•00 issues•00 pull requests•Updated Jan 12, 2024Jan 12, 2024

• wgcna-toolbox

  Public
  Perslab toolbox for Weighted Gene Co-Expression Network Analysis

  R

  •22 forks•66 stars•22 issues•00 pull requests•Updated Jul 1, 2023Jul 1, 2023

• Falk-2022

  Public
  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 12, 2023Apr 12, 2023

• critical_period

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Mar 31, 2022Mar 31, 2022

• fred-2022

  Public
  Analysis scripts for fred-2022 NASH project

  R

  •00 forks•22 stars•00 issues•00 pull requests•Updated Dec 2, 2021Dec 2, 2021

• timshel-2020

  Public
  Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)

  gwassingle-cell-genomicsobesity+ 2

  gwassingle-cell-genomicsobesitycellexcellect

  R

  •

  GNU General Public License v3.0

  •44 forks•1414 stars•00 issues•00 pull requests•Updated May 20, 2021May 20, 2021

• Ludwig-Diabetes-2021

  Public
  00 forks•22 stars•00 issues•00 pull requests•Updated May 20, 2021May 20, 2021

• brown-rausch-iscience-2021

  Public
  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 6, 2021Apr 6, 2021

• Ludwig-2021

  Public
  R

  •00 forks•22 stars•11 issue•00 pull requests•Updated Mar 25, 2021Mar 25, 2021

• CUTnTag_analysis

  Public
  HTML

  •00 forks•11 star•00 issues•00 pull requests•Updated Feb 26, 2021Feb 26, 2021

• Merino_2020

  Public
  Shell

  •

  MIT License

  •11 fork•11 star•00 issues•00 pull requests•Updated Dec 15, 2020Dec 15, 2020

• Kakava-Georgiado-2020

  Public
  Scripts for making figures as presented in the paper by Kakava-Georgiado 2020

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Nov 9, 2020Nov 9, 2020

• geneNetworkScripts

  Public
  R scripts for further analysis of gene networks

  R

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•00 pull requests•Updated Oct 6, 2020Oct 6, 2020

• 19-BMI-brain-genesettests

  Public
  code for geneset tests for BMI brain paper

  R

  •

  Other

  •11 fork•00 stars•00 issues•00 pull requests•Updated Jun 26, 2020Jun 26, 2020

• 19-BMI-brain-compare-celltypes

  Public
  comparisons of celltype results for BMI brain project

  R

  •00 forks•00 stars•00 issues•00 pull requests•Updated Apr 27, 2020Apr 27, 2020

• perslab-sc-library

  Public
  Python scripts and data files for recurrent tasks

  Python

  •

  GNU General Public License v3.0

  •00 forks•00 stars•00 issues•11 pull request•Updated Apr 27, 2020Apr 27, 2020