Repositories list

• tatami_hdf5

  Public
  tatami bindings for HDF5 matrices

  C++

  •

  MIT License

  •0•0•0•0•Updated Mar 29, 2026Mar 29, 2026

• eminem

  Public
  C++ parsers for Matrix Market files

  C++

  •

  MIT License

  •0•1•1•0•Updated Mar 25, 2026Mar 25, 2026

• tatami_mtx

  Public
  Matrix Market to tatami matrices

  C++

  •

  MIT License

  •0•0•1•0•Updated Mar 25, 2026Mar 25, 2026

• tatami_stats

  Public
  Matrix statistics for tatami

  C++

  •

  MIT License

  •0•0•0•0•Updated Mar 3, 2026Mar 3, 2026

• beachmat

  Public
  Clone of the Bioconductor repository for the beachmat package.

  matrix-librarybioconductor-packagehuman-cell-atlas

  matrix-librarybioconductor-packagehuman-cell-atlas

  C++

  •5•5•6•0•Updated Feb 27, 2026Feb 27, 2026

• tatami

  Public
  C++ API for various matrix types.

  cpp

  cpp

  C++

  •

  MIT License

  •2•15•2•0•Updated Feb 27, 2026Feb 27, 2026

• developer-guide

  Public
  Developer guide for tatami libraries

  MIT License

  •0•1•0•0•Updated Feb 25, 2026Feb 25, 2026

• tatami_r

  Public
  tatami bindings for abstract R matrices

  C++

  •

  MIT License

  •0•1•0•0•Updated Feb 25, 2026Feb 25, 2026

• tatami_layered

  Public
  Create layered tatami matrices for sparse positive counts

  C++

  •

  MIT License

  •0•0•0•0•Updated Feb 25, 2026Feb 25, 2026

• tatami_python

  Public
  tatami bindings for abstract Python matrices

  C++

  •

  MIT License

  •0•1•0•0•Updated Feb 24, 2026Feb 24, 2026

• tatami_mult

  Public
  Matrix multiplication for tatami

  C++

  •

  MIT License

  •0•0•0•0•Updated Feb 24, 2026Feb 24, 2026

• test-divmult

  Public
  Replacing division with reciprocal multiplication

  performance-testing

  performance-testing

  C++

  •

  MIT License

  •0•0•0•0•Updated Jan 21, 2026Jan 21, 2026

• eztimer

  Public
  Easy timing of C++ functions

  performance-testing

  performance-testing

  C++

  •

  MIT License

  •0•0•0•0•Updated Jan 14, 2026Jan 14, 2026

• mattress

  Public
  Python interface to tatami representations

  matrixtatami

  matrixtatami

  Python

  •

  MIT License

  •0•0•1•0•Updated Jan 4, 2026Jan 4, 2026

• tatami_test

  Public
  Test utilities for tatami libraries

  C++

  •

  MIT License

  •0•0•0•0•Updated Dec 22, 2025Dec 22, 2025

• tatami_chunked

  Public
  Developer utilities for creating chunked matrix representations

  C++

  •

  MIT License

  •0•0•1•0•Updated Nov 12, 2025Nov 12, 2025

• test-extractor_reallocation

  Public
  Performance implications of Extractor and buffer reallocations

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Nov 10, 2025Nov 10, 2025

• beachmat.hdf5

  Public
  Beachmat extensions for HDF5 matrices

  R

  •0•0•1•0•Updated Oct 9, 2025Oct 9, 2025

• beachmat.tiledb

  Public
  Beachmat extensions for TileDB matrices

  R

  •1•0•0•0•Updated Jul 14, 2025Jul 14, 2025

• tatami_tiledb

  Public
  tatami bindings for TileDB-backed matrices

  C++

  •

  MIT License

  •0•0•0•0•Updated Jul 13, 2025Jul 13, 2025

• manticore

  Public
  C++ library for main thread execution

  C++

  •

  MIT License

  •0•1•0•0•Updated Jul 8, 2025Jul 8, 2025

• test-false_sharing

  Public
  Check performance implications of false sharing

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Jan 12, 2025Jan 12, 2025

• .github

  Public
  Miscellaneous organization meta-details

  MIT License

  •0•0•0•0•Updated Dec 11, 2024Dec 11, 2024

• gallery

  Public
  Gallery of tatami usage examples

  C++

  •

  MIT License

  •0•0•0•0•Updated Nov 24, 2024Nov 24, 2024

• test-blocked_running_stats

  Public
  Performance testing of blocked calculations of running statistics

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Oct 25, 2024Oct 25, 2024

• test-simple_simd_perf

  Public
  SIMD performance testing for delayed operations

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Oct 25, 2024Oct 25, 2024

• test-summation_speed

  Public
  Performance testing of summation strategies

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Mar 26, 2024Mar 26, 2024

• test-isometric_unary_sparse_expansion

  Public
  Performance testing of sparse expansion for isometric unary operations.

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Mar 24, 2024Mar 24, 2024

• test-sparse_priority_queue

  Public
  Performance testing of a priority queue for sparse secondary extraction.

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Mar 22, 2024Mar 22, 2024

• test-sparse_indexed_extraction

  Public
  Performance tests for sparse indexed extraction.

  performance-testing

  performance-testing

  C++

  •0•0•0•0•Updated Mar 21, 2024Mar 21, 2024