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    22 repositories

    • crdm-tools

      Public
      Tools to run and deploy CRDM services
      Python
      •
      Apache License 2.0
      •0•1•10•3•Updated Jan 19, 2026Jan 19, 2026

    • miade

      Public
      A set of tools for extracting formattable data from clinical notes stored in electronic health record systems.
      nlpnatural-language-processingelectronic-health-records
      Python
      •
      Other
      •0•10•7•0•Updated Jan 19, 2026Jan 19, 2026

    • CogStackCohort

      Public
      A MedCAT annotations retrieval tool for cohort identification
      HTML
      •
      Other
      •4•0•0•0•Updated Dec 11, 2025Dec 11, 2025

    • jupyterlab-docker

      Public
      Collection of JupyterLab Docker services to run the platform for multiple users
      Shell
      •
      GNU General Public License v3.0
      •2•0•0•0•Updated Dec 3, 2025Dec 3, 2025

    • patient-clinical-timeline-extraction

      Public
      Set of NLP models and tools for constructing patient clinical timelines from free text in Electronic Healthcare Records (EHRs).
      Jupyter Notebook
      •0•0•0•0•Updated Oct 28, 2025Oct 28, 2025

    • safeLLM

      Public
      0•0•0•0•Updated Sep 22, 2025Sep 22, 2025

    • synthetic-llm-medical-text

      Public
      Set of tools to create synthetic free text data in the medical domain using Large Language Models (LLMs)
      Python
      •0•0•0•0•Updated Sep 17, 2025Sep 17, 2025

    • cogstack-streamlit-components

      Public
      CogStack Streamlit component to annotate text
      JavaScript
      •
      Apache License 2.0
      •0•0•1•0•Updated Sep 5, 2025Sep 5, 2025

    • medical-qa-feedback-dashboard

      Public
      A web-based interface for collecting feedback and gold standard answers from experts to finetune and evaluate medical Question & Answering and RAG systems.
      Python
      •0•0•0•0•Updated Aug 22, 2025Aug 22, 2025

    • CDMConnector

      Public
      A pipe friendly way to interact with an OMOP Common Data Model
      HTML
      •
      Apache License 2.0
      •15•0•0•0•Updated Jun 12, 2025Jun 12, 2025

    • miade-datasets

      Public
      Jupyter Notebook
      •1•3•1•0•Updated Apr 15, 2025Apr 15, 2025

    • miade-llm

      Public
      MiADE + LLMs for detailed diagnoses extraction
      nlphealthcarellm
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Feb 24, 2025Feb 24, 2025

    • streamlit-ui

      Public
      Python
      •0•0•0•0•Updated Feb 21, 2025Feb 21, 2025

    • fhir-term-browser

      Public
      Terminology browser providing tools to explore the contents of a FHIR-compliant Terminology Service (STU3)
      JavaScript
      •
      GNU General Public License v3.0
      •0•1•0•2•Updated Sep 1, 2024Sep 1, 2024

    • miade-tutorials

      Public
      Notebook tutorials for MiADE
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Aug 29, 2024Aug 29, 2024

    • test-uclh-research-discovery

      Public
      Test fork of the Health Data Science Demos website from UCLH Foundry
      JavaScript
      •7•0•0•0•Updated Apr 24, 2024Apr 24, 2024

    • MedCAT

      Public
      Medical Concept Annotation Tool
      Python
      •
      Other
      •117•0•0•0•Updated Jan 2, 2024Jan 2, 2024

    • keytrials-assets

      Public
      Other
      •0•0•0•0•Updated Jul 24, 2023Jul 24, 2023

    • recruit-tests

      Public
      Tests and other files for recruitment purposes
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Jul 21, 2022Jul 21, 2022

    • uclh-data-training

      Public
      Repository for online book to support UCLH data science fellows
      HTML
      •1•0•0•0•Updated Jul 6, 2022Jul 6, 2022

    • learning-datascience

      Public
      Data science fellow programme run by UCLH. This repository contains documentation and training materials.
      HTML
      •
      Creative Commons Attribution 4.0 International
      •5•14•3•0•Updated May 5, 2022May 5, 2022

    • dex-assets

      Public
      This project contains all the assets used by DEX that need public access, for e.g. logos in notification e-mails. The files will be linked from this repository …
      Other
      •0•0•0•0•Updated Aug 31, 2021Aug 31, 2021