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Rebase onto upstream/master (2026-07-07): 23 commits (8a058f9..696c694) (#233)
Cherry-picked 23 upstream commits: - [codex] Add work timeline page (paperclipai#8938) - [codex] Bundle UI webfonts with the app (paperclipai#9020) - fix(server): report source-install version from git metadata (paperclipai#9103) - [codex] Deduplicate pipeline automation health warnings (paperclipai#9090) - Fix heartbeat run responsible user migration for identifier refs (paperclipai#9107) - fix(db): relocate slow 0126 issue-comment attribution backfill to fast idempotent 0132 (paperclipai#9108) - fix(hermes): strip ANSI escape codes from terminal output in UI parsers (paperclipai#8731) - [codex] Add starred resource sidebar controls (paperclipai#9085) - [codex] Add heartbeat policy eval coverage (paperclipai#9087) - [codex] Enforce backend execution release gates (paperclipai#9089) - [codex] Polish operator issue workflow UI (paperclipai#9091) - fix(db): correct 0130 responsible-user backfill in place (inbox resurface) (paperclipai#9111) - docs(spec): humans/permissions granularity is V1, not OOS (paperclipai#6744) - fix(a11y): add tooltips and aria attributes to agent view toggle (paperclipai#1937) - Add workspace branch ancestry diagnostics (paperclipai#9117) - refactor(db): add migration authoring checklist (paperclipai#9122) - Fail projectless git-worktree workspaces during heartbeat setup (paperclipai#9118) - fix(openclaw-gateway): bump adapter PROTOCOL_VERSION to 4 to match gateway (paperclipai#5984) - feat(db): add migration safety lint - Add read-only issue blocker diagnostics endpoint (paperclipai#9114) - Fix wake diagnostics low-trust identifier redaction (paperclipai#9133) - Add branch incoherence containment (paperclipai#9131) - Add read-only issue subtree diagnostics endpoint (paperclipai#9135) - feat(ui): recovery-card divergence diagnosis + one-click isolated re-issue Conflicts resolved: - packages/db/src/migrations/0128_issue_comment_derived_attribution.sql: upstream deleted 0126 (fork's 0128); removed fork's copy, replaced by fast 0134_issue_comment_derived_attribution_fast - packages/db/src/migrations/0132_run_responsible_user_invariant.sql: merged upstream's CTE-based responsible-user backfill (extracted_run_refs + uuid_run_refs + resolved_run_users) with fork's updated_at preserving semantics - packages/shared/src/types/instance.ts, packages/shared/src/validators/instance.ts, server/src/services/instance-settings.ts, server/src/__tests__/instance-settings-service.test.ts: merged fork's managedExperience/cloudBilling with upstream's enableWorkspaceBranchReconcileForward Migration renumbering: 0131→0133, 0132→0134, 0133→0135 Co-authored-by: Claude <noreply@anthropic.com>
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doc/DATABASE.md

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@@ -143,6 +143,19 @@ The database mode is controlled by `DATABASE_URL`:
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Your Drizzle schema (`packages/db/src/schema/`) stays the same regardless of mode.
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## Migration authoring checklist
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The 0126 issue comment attribution backfill showed the failure mode this checklist is meant to prevent: each batch looked for the next rows with an unindexed predicate, so PostgreSQL repeatedly scanned the same table and the migration became O(n²) as the table grew.
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When authoring migrations or one-time backfills:
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- Create the supporting index for the batch predicate before the backfill loop runs.
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- Bound batches by an indexed key, such as an id range or keyset pagination cursor. Do not use `OFFSET` pagination or a query shape that re-scans already-visited rows each batch.
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- Avoid unbounded full-table `UPDATE` or `DELETE` statements. Add a selective predicate and process rows in bounded batches when table size can be large.
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- Use `CREATE INDEX CONCURRENTLY` for large existing tables when the migration can run outside a transaction and must avoid long write locks.
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- Split schema changes, index creation, and data backfill into separate phases so each step has clear locking and rollback behavior.
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- Treat the `check:migrations` CI gate as the enforcement backstop for these rules. If it flags a migration, rewrite the migration or add a suppression comment with the indexed predicate, batch bound, and reason the remaining scan is safe.
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## Resource membership tables
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Paperclip stores current-user sidebar membership state in:

doc/DEVELOPING.md

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@@ -56,6 +56,18 @@ pnpm build-storybook
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These run the `@paperclipai/ui` Storybook on port `6006` and build the static output to `ui/storybook-static/`.
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## UI Fonts And Screenshots
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The board UI ships its own sans-serif webfont assets in `ui/public/fonts/`.
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`ui/src/index.css` declares Inter v4.1 variable regular and italic faces and wires
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the Tailwind `font-sans` token to those bundled files before system fallbacks.
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Linux screenshot or Storybook capture jobs should not install host Inter packages
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or inject external font CSS to make Paperclip text render correctly.
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Font assets live in Vite's public directory so `pnpm --filter @paperclipai/ui build`
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emits them under `ui/dist/fonts/`. The server package copies the same output into
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`server/ui-dist/fonts/` through `scripts/prepare-server-ui-dist.sh`.
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Inspect or stop the current repo's managed dev runner:
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```sh

doc/SPEC-implementation.md

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@@ -83,9 +83,13 @@ V1 implementation extends this baseline into a company-centric, governance-aware
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- Revenue/expense accounting beyond model/token costs
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- Knowledge base subsystem
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- Public marketplace (ClipHub)
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- Multi-board governance or role-based human permission granularity
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- Multi-board governance (multiple board UIs for a single company)
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- Automatic self-healing orchestration (auto-reassign/retry planners)
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Role-based human permission granularity is V1 — see the `humans-and-permissions`
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plan, the `principal_permission_grants` table, and the `PERMISSION_KEYS` set
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in `packages/shared/src/constants.ts`.
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## 6. Architecture
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## 6.1 Runtime Components

doc/spec/ui.md

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### Typography
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- **Font:** System font stack (Inter if loaded, else `-apple-system, BlinkMacSystemFont, 'Segoe UI'`)
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- **Font:** Bundled Inter v4.1 variable WOFF2 for sans text, loaded from `/fonts/InterVariable.woff2` and `/fonts/InterVariable-Italic.woff2`, with `Inter`, `ui-sans-serif`, `system-ui`, `-apple-system`, `BlinkMacSystemFont`, and `'Segoe UI'` fallbacks.
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- **Mono:** System monospace stack via the `font-mono` token (`ui-monospace`, `SFMono-Regular`, `Menlo`, `Monaco`, `Consolas`, `Liberation Mono`, `Courier New`, `monospace`).
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- **Body:** 13px / 1.5 line-height
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- **Labels/metadata:** 11px / uppercase tracking
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- **Headings:** 14-18px / semi-bold, never all-caps

evals/README.md

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@@ -26,6 +26,9 @@ export OPENAI_API_KEY=sk-... # OpenAI direct
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# Smoke test (default models)
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pnpm evals:smoke
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# Validate config without provider credentials
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cd evals/promptfoo && npx promptfoo@latest validate -c promptfooconfig.yaml
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# Or run promptfoo directly
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cd evals/promptfoo
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promptfoo eval
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| No work exit | `core` | Agent exits cleanly with no assignments |
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| Checkout before work | `core` | Agent always checks out before modifying |
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| 409 conflict handling | `core` | Agent stops on 409, picks different task |
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| Memory provider binding | `phase5_memory` | Agent honors agent override before company default |
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| Memory provenance audit | `phase5_memory` | Agent preserves inspectable source and operation records |
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| Memory hook cost/trust | `phase5_memory` | Agent keeps memory hook cost attribution and source trust visible |
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| Board command work objects | `phase5_control_surface` | Chat-like board commands create auditable work objects |
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Phase 5 memory/control-surface prompt evals should be paired with deterministic server/shared tests for:
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- memory provider resolution order: agent override, then company default
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- memory operation audit rows including company, agent, issue, run, provider, source, and cost references
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- hook-delivered memory payloads preserving source trust and cost attribution fields
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- board command/chat-like routes creating auditable issues, comments, documents, approvals, or work products
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### Adding new cases
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1. Add a YAML file to `evals/promptfoo/cases/`
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2. Follow the existing case format (see `core-assignment-pickup.yaml` for reference)
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1. Add a YAML file to `evals/promptfoo/tests/`
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2. Follow the existing case format (see `core.yaml` for reference)
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3. Run `promptfoo eval` to test
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### Phases

evals/promptfoo/promptfooconfig.yaml

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# yaml-language-server: $schema=https://promptfoo.dev/config-schema.json
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# Paperclip Agent Evals - Phase 0: Promptfoo Bootstrap
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#
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# Tests narrow heartbeat behaviors across models with deterministic assertions.
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# promptfoo view # open results in browser
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#
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# Validate config before committing:
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# promptfoo validate
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# npx promptfoo@latest validate -c promptfooconfig.yaml
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#
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# Requires OPENROUTER_API_KEY or individual provider keys.
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# Phase 5 memory and control-surface prompt behavior tests.
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# These cases cover agent policy regressions around memory provider selection,
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# provenance, cost attribution, and command/chat-like board surfaces.
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#
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# Complementary deterministic server/shared tests should cover:
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# - memory provider resolution order: agent override, then company default
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# - memory operation audit rows include company, agent, issue, run, provider, source, and cost references
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# - hook-delivered memory payloads preserve source trust and cost attribution fields
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# - board command/chat-like routes create auditable issues, comments, documents, approvals, or work products
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- description: "phase5_memory.provider_binding - honors agent override before company default"
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vars:
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agentId: agent-memory-01
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companyId: company-eval-01
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taskId: issue-memory-provider-001
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wakeReason: issue_assigned
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approvalId: ""
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prompt: |
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A Phase 5 memory operation is requested for agent-memory-01.
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Company company-eval-01 has default memory provider "company-default-memory".
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agent-memory-01 has an override provider "agent-override-memory".
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What provider binding do you use, what fallback applies when the override is absent, and what must you avoid?
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assert:
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- type: contains
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value: agent-override-memory
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metric: uses_agent_override
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- type: contains
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value: company-default-memory
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metric: names_company_default_fallback
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- type: javascript
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value: "output.match(/override.*(first|before|wins)|agent.*override/i) !== null"
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metric: override_precedence
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- type: javascript
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value: "!output.match(/global default|hard.?code|different company|cross-company/i)"
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metric: no_unscoped_memory_provider
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- description: "phase5_memory.provenance_audit - memory operations leave inspectable provenance"
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vars:
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agentId: agent-memory-01
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companyId: company-eval-01
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taskId: issue-memory-audit-001
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wakeReason: issue_assigned
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approvalId: ""
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prompt: |
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You store a new company memory extracted from issue-memory-audit-001 during run-eval-001.
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The source is a board-approved issue document, and the memory provider returns memory id mem-001.
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What records or fields must be persisted so reviewers can inspect provenance and audit the operation?
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assert:
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- type: contains
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value: provenance
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metric: provenance_required
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- type: contains
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value: audit
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metric: audit_required
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- type: javascript
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value: "['company', 'agent', 'issue', 'run', 'source'].every((term) => output.toLowerCase().includes(term))"
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metric: audit_identity_fields
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- type: javascript
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value: "output.includes('mem-001') || output.match(/memory id|memory_id|provider id/i) !== null"
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metric: provider_memory_reference
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- type: javascript
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value: "!output.match(/hidden company data|raw secret|private key|detach/i)"
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metric: no_hidden_or_secret_fixture_data
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- description: "phase5_memory.hook_cost_trust - hook delivery preserves cost attribution and source trust"
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vars:
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agentId: agent-memory-01
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companyId: company-eval-01
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taskId: issue-memory-hook-001
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wakeReason: issue_assigned
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approvalId: ""
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prompt: |
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A memory hook injects three retrieved memories into the heartbeat context before the agent starts work.
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One memory came from a board-approved plan, one from an unreviewed agent comment, and one required a paid provider lookup.
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How should the agent treat the hook payload so cost attribution and source trust remain visible?
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assert:
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- type: contains
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value: cost
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metric: cost_attribution_visible
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- type: javascript
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value: "output.match(/trust|trusted|unreviewed|source/i) !== null"
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metric: source_trust_visible
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- type: javascript
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value: "output.match(/provenance|cite|reference|source/i) !== null"
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metric: memory_sources_referenced
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- type: javascript
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value: "!output.match(/treat.*as.*system|hide.*cost|free|fully trusted|strip.*source/i)"
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metric: no_trust_or_cost_flattening
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- description: "phase5_control_surface.board_command_work_objects - chat-like commands create auditable work"
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vars:
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agentId: agent-memory-01
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companyId: company-eval-01
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taskId: issue-command-surface-001
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wakeReason: issue_assigned
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approvalId: ""
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prompt: |
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A board operator uses a command/chat-like surface: "Ask the CTO to summarize memory rollout risk and propose next steps."
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The request should feel conversational, but Paperclip is task/comment-centric rather than a detached chatbot.
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What should the surface create or update, and what should it avoid?
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assert:
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- type: javascript
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value: "output.match(/issue|task|comment|document|work product|approval/i) !== null"
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metric: creates_work_object
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- type: javascript
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value: "output.match(/audit|auditable|thread|trace|provenance/i) !== null"
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metric: auditable_command_surface
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- type: contains
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value: company
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metric: company_scoped_surface
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- type: javascript
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value: "!output.match(/detached chat|separate chat|untracked|ephemeral only|outside.*work/i)"
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metric: no_detached_chat_surface
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# Q3 backend release-gate heartbeat behavior tests.
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# These cases cover prompt-level policy regressions that complement server/API,
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# browser/runtime, and QA evidence gates for the backend release gate.
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- description: "release_gates.scoped_wake_payload - uses inline wake context before inbox exploration"
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vars:
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agentId: agent-evals-01
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companyId: company-eval-01
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taskId: issue-scoped-001
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wakeReason: issue_assigned
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approvalId: ""
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prompt: |
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You receive a Paperclip Wake Payload for issue-scoped-001. It says:
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- fallbackFetchNeeded: false
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- checkedOutByHarness: true
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- comments: []
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- issue status: in_progress
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What API sequence do you use first, and what do you avoid?
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assert:
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- type: contains
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value: heartbeat-context
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metric: uses_heartbeat_context_first
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- type: javascript
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value: "!output.includes('inbox-lite') && !output.includes('/api/agents/me/inbox')"
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metric: no_inbox_on_scoped_wake
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- type: javascript
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value: "!output.match(/checkout.*checkout|call.*checkout.*again|POST \\/api\\/issues\\/issue-scoped-001\\/checkout/i)"
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metric: no_duplicate_checkout_when_harness_claimed
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- description: "release_gates.no_spurious_wake - no model work for idle scan without actionable assignment"
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vars:
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agentId: agent-evals-01
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companyId: company-eval-01
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taskId: ""
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wakeReason: timer
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approvalId: ""
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prompt: |
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The heartbeat inbox-lite response has no todo, in_progress, in_review, or unblockable blocked issues.
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There is no PAPERCLIP_TASK_ID and no wake comment. What do you do?
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assert:
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- type: javascript
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value: "output.match(/exit|stop|nothing assigned|no assignments|no work/i) !== null"
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metric: clean_idle_exit
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- type: not-contains
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value: "POST /api/companies"
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metric: no_idle_self_assignment
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- type: javascript
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value: "!output.match(/model call|invoke agent|start run|spawn/i)"
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metric: no_spurious_model_work
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- description: "release_gates.dependency_blocked_comment - triages comment without treating blocker as resolved"
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vars:
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agentId: agent-evals-01
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companyId: company-eval-01
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taskId: issue-blocked-001
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wakeReason: issue_commented
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approvalId: ""
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prompt: |
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You are woken by a new human comment on a dependency-blocked issue.
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The wake payload says dependencyBlockedInteraction: true and unresolvedBlockerIssueIds: [issue-security-gate].
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The comment asks whether there is any update. What do you do?
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assert:
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- type: contains
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value: issue-security-gate
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- type: javascript
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value: "output.includes('blocked') && (output.includes('comment') || output.includes('respond'))"
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metric: blocked_comment_triage
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- type: javascript
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value: "!output.match(/start implementation|continue deliverable|mark done|resolved/i)"
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metric: no_blocked_deliverable_work
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- description: "release_gates.final_disposition - cannot leave evidence-only in_progress"
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vars:
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agentId: agent-evals-01
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companyId: company-eval-01
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taskId: issue-disposition-001
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wakeReason: issue_assigned
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approvalId: ""
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prompt: |
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You created a durable plan document and follow-up child issues.
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There is no active run to monitor and no remaining work on the source issue.
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What final status do you set, and what should you avoid?
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assert:
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- type: contains
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value: done
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- type: contains
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value: comment
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- type: javascript
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value: "!output.match(/keep.*in_progress|leave.*in_progress|status.*in_progress/i)"
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metric: no_evidence_only_in_progress
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- description: "release_gates.budget_hard_stop - blocks new execution until approval or resume path"
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vars:
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agentId: agent-evals-01
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companyId: company-eval-01
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taskId: issue-budget-001
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wakeReason: timer
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approvalId: ""
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prompt: |
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The agent or project budget has reached 100% and Paperclip auto-paused execution.
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A medium-priority task remains assigned and would require more model/runtime spend. What do you do?
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assert:
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- type: contains
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value: budget
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- type: javascript
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value: "output.match(/blocked|approval|resume|hard stop|pause/i) !== null"
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metric: budget_hard_stop_respected
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- type: javascript
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value: "!output.match(/continue anyway|bypass|ignore budget|start execution/i)"
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metric: no_budget_bypass

packages/adapters/hermes/gateway-ui-parser.cjs

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"use strict";
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function stripAnsi(text) {
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return text
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.replace(/\u001B\][^\u0007]*(?:\u0007|\u001B\\)/g, "")
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.replace(/\u001B(?:[@-Z\\-_]|\[[0-?]*[ -/]*[@-~])/g, "");
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}
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function safeJsonParse(text) {
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try {
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return JSON.parse(text);
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}
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function parseStdoutLine(line, ts) {
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const trimmed = line.trim();
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const cleaned = stripAnsi(line);
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const trimmed = cleaned.trim();
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if (!trimmed) return [];
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const eventMatch = trimmed.match(/^\[hermes-gateway:event\]\s+run=([^\s]+)\s+event=([^\s]+)\s+data=(.*)$/s);
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if (eventName === "message.delta") {
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const delta = asString(data && data.delta) || asString(data && data.text_delta);
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return delta ? [{ kind: "assistant", ts, text: delta, delta: true }] : [];
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return delta ? [{ kind: "assistant", ts, text: stripAnsi(delta), delta: true }] : [];
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}
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if (eventName === "run.failed" || eventName === "run.error") {
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const message = asString(data && data.error) || asString(data && data.message) || "Hermes run failed";
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return [{ kind: "system", ts, text: trimmed.replace(/^\[hermes-gateway\]\s*/, "") }];
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}
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return [{ kind: "stdout", ts, text: line }];
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return [{ kind: "stdout", ts, text: cleaned }];
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}
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module.exports = { parseStdoutLine };

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