Update: 3Dtrees: Overviews v1.0.0+galaxy1 (bgruening#1709)

* resolve tool version issue

* increase galaxy tool shed version

* update xml

Author: kgerb

tools/3dtrees_overviews/overviews.xml

@@ -2,26 +2,26 @@
     <description>generates 3D overview images</description>
     <macros>
         <token name="@TOOL_VERSION@">1.0.0</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
     </macros>
     <requirements>
-        <container type="docker">ghcr.io/3dtrees-earth/tool_overviews:0.2</container>
+        <container type="docker">ghcr.io/3dtrees-earth/tool_overviews:@TOOL_VERSION@</container>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
       export MPLCONFIGDIR=\$TMPDIR &&
-      mkdir ./output_dir/ &&
-      ln -s $input input.laz &&
-          python -u /src/run.py 
-          --dataset-path input.laz
+      mkdir -p ./output_dir/ &&
+      ln -s '$input' input.laz &&
+      python -u /src/run.py 
+          --dataset-path input.laz 
           --max-points '$max_points' 
           --section-width '$section_width' 
           --image-width '$image_width' 
           --image-height '$image_height' 
           --top-views-deg '$top_views_deg' 
           --cmap '$cmap' 
-          --camera-distance '$camera_distance' 
+          --camera-distance '$camera_distance'
           --output-dir ./output_dir/
-          ]]>
+      ]]>
   </command>
     <inputs>
         <param name="input" type="data" format="laz" label="Point Cloud Dataset" help="LAZ point cloud file to process"/>
@@ -57,7 +57,7 @@
         <collection name="section_views" type="list" label="Section View Images">
             <discover_datasets pattern="(?P&lt;name&gt;section_.*\.png)" directory="./output_dir/" recurse="false" visible="false" format="png"/>
         </collection>
-        <data name="overview_round" format="gif" label="Overview Animation" from_work_dir="overview_round.gif"/>
+        <data name="overview_round" format="gif" label="Overview Animation" from_work_dir="output_dir/overview_round.gif"/>
     </outputs>
     <tests>
         <test expect_num_outputs="3">
@@ -85,46 +85,46 @@
     </tests>
     <help format="markdown">
 
-**What it does**
-
-This tool generates 3D overview visualizations from point cloud dataset. It creates:
-
-1. **Top View Images**: A series of top-down views rotated around the point cloud center
-2. **Section Views**: Cross-sectional views from north-south and east-west directions  
-3. **Overview Animation**: An animated GIF showing the rotation sequence
-
-The tool automatically handles large datasets by downsampling to a manageable number of points while preserving the overall structure and appearance.
-
------
-
-**Input**
-
-- **Point Cloud Dataset**: LAZ format point cloud file
-- **Maximum Points**: Limit for downsampling (default: 100M points)
-- **Section Width**: Width of cross-sectional views in meters
-- **Image Dimensions**: Width and height of output images in pixels
-- **Top View Rotation**: Angular step size for rotation sequence
-- **Color Map**: Visualization color scheme (height-based coloring)
-- **Camera Distance**: Distance from point cloud center for rendering
-
------
-
-**Output**
-
-- **Top View Images**: Collection of PNG images showing top-down views at different rotation angles
-- **Section View Images**: Collection of PNG images showing cross-sectional views
-- **Overview Animation**: GIF file showing the complete rotation sequence
-
------
-
-**Example**
-
-For a forest point cloud dataset, this tool will generate:
-- 36 top view images (every 10 degrees)
-- 2 section view images (north-south and east-west cuts)
-- 1 animated GIF showing the complete 360° rotation
-
-The images use height-based coloring to show terrain and vegetation structure.
+  **What it does**
+  
+  This tool generates 3D overview visualizations from point cloud dataset. It creates:
+  
+  1. **Top View Images**: A series of top-down views rotated around the point cloud center
+  2. **Section Views**: Cross-sectional views from north-south and east-west directions  
+  3. **Overview Animation**: An animated GIF showing the rotation sequence
+  
+  The tool automatically handles large datasets by downsampling to a manageable number of points while preserving the overall structure and appearance.
+  
+  -----
+  
+  **Input**
+  
+  - **Point Cloud Dataset**: LAZ format point cloud file
+  - **Maximum Points**: Limit for downsampling (default: 100M points)
+  - **Section Width**: Width of cross-sectional views in meters
+  - **Image Dimensions**: Width and height of output images in pixels
+  - **Top View Rotation**: Angular step size for rotation sequence
+  - **Color Map**: Visualization color scheme (height-based coloring)
+  - **Camera Distance**: Distance from point cloud center for rendering
+  
+  -----
+  
+  **Output**
+  
+  - **Top View Images**: Collection of PNG images showing top-down views at different rotation angles
+  - **Section View Images**: Collection of PNG images showing cross-sectional views
+  - **Overview Animation**: GIF file showing the complete rotation sequence
+  
+  -----
+  
+  **Example**
+  
+  For a forest point cloud dataset, this tool will generate:
+  - 36 top view images (every 10 degrees)
+  - 2 section view images (north-south and east-west cuts)
+  - 1 animated GIF showing the complete 360° rotation
+  
+  The images use height-based coloring to show terrain and vegetation structure.
 
     </help>
     <creator>