Merge pull request #30 from pnnl/develop

Develop

Author: brendapraggastis

docs/build/.doctrees/algorithms/algorithms.doctree

@@ -560,7 +560,7 @@ <h1>Source code for algorithms.homology_mod2</h1><div class="highlight"><pre>
 <span class="sd">    </span>
 <span class="sd">    Returns</span>
 <span class="sd">    -------</span>
-<span class="sd">    L, R, S, Linv, Rinv : np.arrays</span>
+<span class="sd">    L, R, S, Linv : np.arrays</span>
 <span class="sd">        LMR = S is the Smith Normal Form of the matrix M. </span>
 <span class="sd">    </span>
 <span class="sd">    Note</span>

docs/build/.doctrees/environment.pickle

@@ -510,7 +510,7 @@ <h4>Homology Mod2<a class="headerlink" href="#homology-mod2" title="Permalink to
 </ul>
 </dd>
 <dt class="field-even">Returns</dt>
-<dd class="field-even"><p><strong>L, R, S, Linv, Rinv</strong> – LMR = S is the Smith Normal Form of the matrix M.</p>
+<dd class="field-even"><p><strong>L, R, S, Linv</strong> – LMR = S is the Smith Normal Form of the matrix M.</p>
 </dd>
 <dt class="field-odd">Return type</dt>
 <dd class="field-odd"><p>np.arrays</p>

docs/build/_modules/algorithms/homology_mod2.html

@@ -19,7 +19,7 @@
 import os
 import shlex
 
-__version__ = "0.3.2"
+__version__ = "0.3.3"
 
 
 # If extensions (or modules to document with autodoc) are in another directory,

docs/build/algorithms/algorithms.html

@@ -399,7 +399,7 @@ def smith_normal_form_mod2(M,track=False):
     
     Returns
     -------
-    L, R, S, Linv, Rinv : np.arrays
+    L, R, S, Linv : np.arrays
         LMR = S is the Smith Normal Form of the matrix M. 
     
     Note
@@ -434,7 +434,6 @@ def smith_normal_form_mod2(M,track=False):
         print(R,'R\n')
 
     for s in range(min(dimL,dimR)):
-        print('.'),
         if track:
             print(f'\ns={s}\n')
         ## Find index pair (rdx,cdx) with value 1 in submatrix M[s:,s:] 

docs/build/searchindex.js

@@ -11,6 +11,7 @@
 setup(
     name='hypernetx',
     packages=['hypernetx',
+              'hypernetx.algorithms',                
               'hypernetx.classes',
               'hypernetx.drawing',
               'hypernetx.reports'],