Merge pull request #5 from prehensilecode/cuda-path

Add CUDA utilities path

Author: prehensilecode

Singularity.def

@@ -51,7 +51,7 @@ https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-x86_64.sh \
 && rm /tmp/Miniconda3-latest-Linux-x86_64.sh
 
 # Install conda packages.
-PATH="/opt/conda/bin:$PATH"
+PATH="/opt/conda/bin:/usr/local/cuda-11.1/bin:$PATH"
 conda update -qy conda \
 && conda install -y -c conda-forge \
 openmm=7.5.1 \
@@ -81,7 +81,7 @@ patch -p0 < /app/alphafold/docker/openmm.patch
 chmod u+s /sbin/ldconfig.real
 
 %environment
-export PATH="/opt/conda/bin:$PATH"
+export PATH="/opt/conda/bin:/usr/local/cuda-11.1/bin:$PATH"
 %runscript
 cd /app/alphafold
 ldconfig