Mark old functions as defunct, major version bump

Author: chriscpritchard

CITATION.cff

@@ -11,7 +11,7 @@ authors:
     given-names: Chris C
     orcid: https://orcid.org/0000-0002-1143-9751
 title: "PRISMA2020: R package and ShinyApp for producing PRISMA 2020 compliant flow diagrams"
-version: 0.0.4
+version: 1.0.0
 doi: 10.5281/zenodo.4287834
 date-released: 2022-07-02
 license: MIT

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: PRISMA2020
 Title: Make Interactive 'PRISMA' Flow Diagrams
-Version: 0.0.4
+Version: 1.0.0
 Authors@R: c(
     person(given = "Neal",
            family = "Haddaway",

NAMESPACE

@@ -3,8 +3,6 @@
 export(PRISMA_data)
 export(PRISMA_flowdiagram)
 export(PRISMA_save)
-export(read_PRISMAdata)
-export(sr_flow_interactive)
 importFrom(DT,addRow)
 importFrom(rio,import)
 importFrom(shiny,column)

R/PRISMA_flowdiagram.R

@@ -1820,10 +1820,8 @@ PRISMA_save <- function( #nolint
   }
 }
 
-#' Plot interactive flow diagram for systematic reviews - DEPRECATED
-#' @description DEPRECATED -
-#' Converts a PRISMA systematic review flow diagram
-#' into an interactive HTML plot, for embedding links from each box.
+#' Defunct function - replaced by "PRISMA_interactive_"
+#' @description Defunct function - replaced by "PRISMA_interactive_"
 #' @seealso [PRISMA_interactive_()]
 #' @param plot A plot object from [PRISMA_flowdiagram()].
 #' @param urls A dataframe consisting of two columns: nodes and urls. The first
@@ -1833,24 +1831,17 @@ PRISMA_save <- function( #nolint
 #' [PRISMA_flowdiagram()]) specifying whether previous studies were sought.
 #' @param other Logical argument (TRUE or FALSE) (supplied through
 #' [PRISMA_flowdiagram()]) specifying whether other studies were sought.
-#' @return An interactive flow diagram plot.
-#' @export
 sr_flow_interactive <- function(plot,
                                 urls,
                                 previous,
                                 other) {
-  .Deprecated("PRISMA_interactive_")
-  return(PRISMA_interactive_(plot, urls, previous, other)) #nolint
+  .Defunct("PRISMA_interactive_")
 }
 
-#' Read in PRISMA flow diagram data - DEPRECATED
-#' @description DEPRECATED -
-#' read in a template CSV containing data for the flow diagram
+#' Defunct function - replaced by "PRISMA_data"
+#' @description Defunct function - replaced by "PRISMA_data"
 #' @seealso [PRISMA_data()]
 #' @param data File to read in.
-#' @return A list of objects needed to plot the flow diagram
-#' @export
 read_PRISMAdata <- function(data){ #nolint
-  .Deprecated("PRISMA_data")
-  return(PRISMA_data(data))
-}
+  .Defunct("PRISMA_data")
+}