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"""ME5311 Project 2 pipeline."""
from __future__ import annotations
import time
from pathlib import Path
import numpy as np
from load_data import load_vector_field
from POD import POD
from DMD import DMD
from SINDy import SINDy
from LSTM import LSTMPredictor
from metrics import (
compute_relative_error,
compute_rmse,
compute_correlation,
compute_r2,
prediction_horizon,
)
import plot
DATA_PATH = Path("data/vector_64.npy")
OUTPUT_DIR = Path("output")
NT_TRAIN = 10_500
NT_VAL = 12_000
NT_TOTAL = 15_000
N_POD = 50
R_DMD = 20
DMD_DELAY = 4
R_SINDY = 30
R_LSTM = 10
LSTM_SEQ = 16
LSTM_HIDDEN = 96
LSTM_LAYERS = 2
LSTM_DROPOUT = 0.10
LSTM_LR = 1e-3
LSTM_BATCH = 256
LSTM_PATIENCE = 6
LSTM_EPOCHS = 40
DT = 0.2
SNAP_IDX = 3
SAVE_FIG = str(OUTPUT_DIR / "report_figure.png")
SAVE_TXT = str(OUTPUT_DIR / "results_summary.txt")
RECEDING_ONE_STEP = False
def _write_results_txt(path: str, records: list[dict], pod_energy: float,
elapsed: float, n_sp: int) -> None:
"""Write a human-readable results summary to *path*."""
sep = "=" * 100
sep2 = "-" * 100
lines = [
sep,
" ME5311 Project 2 — Results Summary",
sep,
"",
"Dataset",
sep2,
f" Spatial DOF : {n_sp:,} (64 × 64 × 2 components)",
f" Total snapshots : {NT_TOTAL:,} (Δt = {DT}, span = {NT_TOTAL*DT:.0f} t.u.)",
f" Train / Val / Test : {NT_TRAIN:,} / {NT_VAL-NT_TRAIN:,} / {NT_TOTAL-NT_VAL:,}"
f" ({100*NT_TRAIN//NT_TOTAL}% / "
f"{100*(NT_VAL-NT_TRAIN)//NT_TOTAL}% / "
f"{100*(NT_TOTAL-NT_VAL)//NT_TOTAL}%)",
"",
"Dimensionality Reduction (POD)",
sep2,
f" Modes retained : {N_POD}",
f" Cumulative energy : {pod_energy:.4f} %",
"",
"Prediction Results",
sep2,
f" {'Method':<8} {'Val RelErr':>10} {'Test RelErr':>11} "
f"{'Horizon(s)':>11} {'RMSE':>8} {'Corr':>7} {'R2':>7} "
f"{'Train(s)':>9} {'Infer(ms/step)':>14} {'Complexity (train/infer)'}",
f" {'-'*8} {'-'*10} {'-'*11} {'-'*11} {'-'*8} {'-'*7} {'-'*7} "
f"{'-'*9} {'-'*14} {'-'*24}",
]
for r in records:
lines.append(
f" {r['name']:<8} {r['val_re']:>10.4f} {r['test_re']:>11.4f} "
f"{r['horizon']:>11.2f} {r['rmse']:>8.4f} {r['corr']:>7.4f} {r['r2']:>7.4f} "
f"{r['train_time']:>9.2f} {r['infer_time']*1e3:>14.4f} {r['complexity']}"
)
lines += [
"",
"Notes",
sep2,
" Horizon : time (s) at which relative error first exceeds 50 %.",
" RMSE / Corr: computed over the full test set (all snapshots).",
" Train(s) : wall-clock seconds for model fitting.",
" Infer(ms) : wall-clock milliseconds per predicted step (test set / nt_test).",
" Complexity : theoretical big-O for training / per-step inference.",
" r = POD modes, n = training snapshots.",
"",
f" Total wall-clock time : {elapsed/60:.1f} min",
sep,
]
Path(path).write_text("\n".join(lines) + "\n", encoding="utf-8")
print(f"Results summary saved → {path}")
def main() -> None:
t_wall = time.perf_counter()
OUTPUT_DIR.mkdir(exist_ok=True)
print("=" * 64)
print("Loading dataset …")
raw = load_vector_field(DATA_PATH)
nt, ny, nx, nc = raw.shape
n_sp = ny * nx * nc
X_flat = raw.reshape(nt, n_sp)
X_train = np.array(X_flat[:NT_TRAIN], dtype=np.float64)
X_val = np.array(X_flat[NT_TRAIN:NT_VAL], dtype=np.float64)
X_test = np.array(X_flat[NT_VAL:], dtype=np.float64)
nt_val = len(X_val)
nt_test = len(X_test)
print(f" train = {NT_TRAIN:,} | val = {nt_val:,} | test = {nt_test:,} | DOF = {n_sp:,}")
print("\n[1/4] Fitting POD …")
pod = POD(n_modes=N_POD)
pod.fit(X_train)
ce = pod.cumulative_energy_
print(f" {N_POD} modes → {ce[-1]*100:.2f} % of total energy")
print(f" DMD uses first {R_DMD} modes | SINDy uses first {R_SINDY} modes"
f" | LSTM uses first {R_LSTM} modes")
Z_train = pod.transform(X_train)
Z_val = pod.transform(X_val)
Z_test = pod.transform(X_test)
re_rec_val = compute_relative_error(X_val, pod.inverse_transform(Z_val))
re_rec_test = compute_relative_error(X_test, pod.inverse_transform(Z_test))
print(f" POD-{N_POD} reconstruction error — val: {re_rec_val.mean():.4f}"
f" | test: {re_rec_test.mean():.4f}")
print(f"\n[2/4] Fitting Hankel-DMD ({R_DMD} of {N_POD} POD modes, delay={DMD_DELAY}) …")
Z_train_dmd = Z_train[:, :R_DMD]
Z_val_dmd = Z_val[:, :R_DMD]
dmd = DMD(n_modes=None, stabilise=True, delay=DMD_DELAY)
_t0 = time.perf_counter(); dmd.fit(Z_train_dmd); dmd_train_time = time.perf_counter() - _t0
def _pad_dmd(Z_d):
Z_full = np.zeros((Z_d.shape[0], N_POD))
Z_full[:, :R_DMD] = Z_d
return Z_full
if RECEDING_ONE_STEP:
Z_dmd_val = np.empty((nt_val, R_DMD))
ref_val = np.vstack([Z_train_dmd[-(DMD_DELAY + 1):], Z_val_dmd])
for t in range(nt_val):
Z_dmd_val[t] = dmd.predict(1, z0=ref_val[t:t + DMD_DELAY + 1])[0]
else:
Z_dmd_val = dmd.predict(nt_val, z0=Z_train_dmd[-(DMD_DELAY + 1):])
re_dmd_val = compute_relative_error(X_val, pod.inverse_transform(_pad_dmd(Z_dmd_val)))
print(f" val mean relative error = {re_dmd_val.mean():.4f}")
_t0 = time.perf_counter()
if RECEDING_ONE_STEP:
Z_dmd = np.empty((nt_test, R_DMD))
ref_test = np.vstack([Z_val_dmd[-(DMD_DELAY + 1):], Z_test[:, :R_DMD]])
for t in range(nt_test):
Z_dmd[t] = dmd.predict(1, z0=ref_test[t:t + DMD_DELAY + 1])[0]
else:
Z_dmd = dmd.predict(nt_test, z0=Z_val_dmd[-(DMD_DELAY + 1):])
dmd_infer_time = (time.perf_counter() - _t0) / nt_test
X_dmd = pod.inverse_transform(_pad_dmd(Z_dmd))
re_dmd = compute_relative_error(X_test, X_dmd)
print(f" test mean relative error = {re_dmd.mean():.4f}")
print(f" train {dmd_train_time:.2f}s | infer {dmd_infer_time*1e3:.3f} ms/step")
print(f"\n[3/4] Fitting SINDy ({R_SINDY} POD modes, degree-2 quadratic library) …")
sindy = SINDy(dt=DT, poly_degree=2, threshold=0.005, ridge_alpha=1e-4,
n_iter=20, n_sub=10, discrete=True, clip_sigma=1.8)
_t0 = time.perf_counter()
sindy.fit(Z_train[:, :R_SINDY])
sindy_train_time = time.perf_counter() - _t0
def _pad_sindy(Z_s):
if Z_s.shape[1] == N_POD:
return Z_s
Z_full = np.zeros((Z_s.shape[0], N_POD))
Z_full[:, :R_SINDY] = Z_s
return Z_full
if RECEDING_ONE_STEP:
Z_sindy_val = np.empty((nt_val, R_SINDY))
ref_val_s = np.vstack([Z_train[-1:, :R_SINDY], Z_val[:, :R_SINDY]])
for t in range(nt_val):
Z_sindy_val[t] = sindy.predict(1, z0=ref_val_s[t])[0]
else:
Z_sindy_val = sindy.predict(nt_val, z0=Z_train[-1, :R_SINDY])
re_sindy_val = compute_relative_error(X_val, pod.inverse_transform(_pad_sindy(Z_sindy_val)))
print(f" val mean relative error = {re_sindy_val.mean():.4f}")
_t0 = time.perf_counter()
if RECEDING_ONE_STEP:
Z_sindy = np.empty((nt_test, R_SINDY))
ref_test_s = np.vstack([Z_val[-1:, :R_SINDY], Z_test[:, :R_SINDY]])
for t in range(nt_test):
Z_sindy[t] = sindy.predict(1, z0=ref_test_s[t])[0]
else:
Z_sindy = sindy.predict(nt_test, z0=Z_val[-1, :R_SINDY])
sindy_infer_time = (time.perf_counter() - _t0) / nt_test
X_sindy = pod.inverse_transform(_pad_sindy(Z_sindy))
re_sindy = compute_relative_error(X_test, X_sindy)
print(f" test mean relative error = {re_sindy.mean():.4f}")
print(f" train {sindy_train_time:.2f}s | infer {sindy_infer_time*1e3:.3f} ms/step")
re_lstm_val = None
re_lstm = None
X_lstm = None
lstm_train_time = 0.0
lstm_infer_time = 0.0
print(f"\n[4/4] Fitting LSTM ({R_LSTM} POD modes, seq_len={LSTM_SEQ}) …")
try:
lstm = LSTMPredictor(
seq_len=LSTM_SEQ,
n_features=R_LSTM,
hidden_size=LSTM_HIDDEN,
num_layers=LSTM_LAYERS,
dropout=LSTM_DROPOUT,
learning_rate=LSTM_LR,
epochs=LSTM_EPOCHS,
batch_size=LSTM_BATCH,
patience=LSTM_PATIENCE,
verbose=0,
)
_t0 = time.perf_counter()
lstm.fit(Z_train[:, :R_LSTM], Z_val[:, :R_LSTM])
lstm_train_time = time.perf_counter() - _t0
print(f" device = {lstm.device_}")
def _pad_lstm(Z_l):
if Z_l.shape[1] == N_POD:
return Z_l
Z_full = np.zeros((Z_l.shape[0], N_POD))
Z_full[:, :R_LSTM] = Z_l
return Z_full
if RECEDING_ONE_STEP:
ref_val_l = np.vstack([Z_train[-LSTM_SEQ:, :R_LSTM], Z_val[:, :R_LSTM]])
win_val = np.stack([ref_val_l[t:t + LSTM_SEQ] for t in range(nt_val)], axis=0)
Z_lstm_val = lstm.predict_windows(win_val)
else:
Z_lstm_val = lstm.predict(nt_val, z0=Z_train[-LSTM_SEQ:, :R_LSTM])
re_lstm_val = compute_relative_error(X_val, pod.inverse_transform(_pad_lstm(Z_lstm_val)))
print(f" val mean relative error = {re_lstm_val.mean():.4f}")
_t0 = time.perf_counter()
if RECEDING_ONE_STEP:
ref_test_l = np.vstack([Z_val[-LSTM_SEQ:, :R_LSTM], Z_test[:, :R_LSTM]])
win_test = np.stack([ref_test_l[t:t + LSTM_SEQ] for t in range(nt_test)], axis=0)
Z_lstm = lstm.predict_windows(win_test)
else:
Z_lstm = lstm.predict(nt_test, z0=Z_val[-LSTM_SEQ:, :R_LSTM])
lstm_infer_time = (time.perf_counter() - _t0) / nt_test
X_lstm = pod.inverse_transform(_pad_lstm(Z_lstm))
re_lstm = compute_relative_error(X_test, X_lstm)
print(f" test mean relative error = {re_lstm.mean():.4f}")
print(f" train {lstm_train_time:.2f}s | infer {lstm_infer_time*1e3:.3f} ms/step")
except ImportError as exc:
print(f" LSTM skipped: {exc}")
print("\n Per-step relative error (test):")
if re_lstm is None:
print(f" {'step':>6} {'DMD':>8} {'SINDy':>8} {'POD-rec':>8}")
else:
print(f" {'step':>6} {'DMD':>8} {'SINDy':>8} {'LSTM':>8} {'POD-rec':>8}")
re_rec_per = compute_relative_error(X_test, pod.inverse_transform(Z_test))
for t in [0, 1, 5, 10, 50, 100, 500, 1000]:
if t < nt_test:
if re_lstm is None:
print(f" {t:>6} {re_dmd[t]:>8.4f} {re_sindy[t]:>8.4f} {re_rec_per[t]:>8.4f}")
else:
print(f" {t:>6} {re_dmd[t]:>8.4f} {re_sindy[t]:>8.4f} {re_lstm[t]:>8.4f}"
f" {re_rec_per[t]:>8.4f}")
X_mean_pred = np.tile(pod.mean_, (nt_test, 1))
corr_mean = compute_correlation(X_test, X_mean_pred)
re_mean = compute_relative_error(X_test, X_mean_pred).mean()
print(f"\n Baseline — mean-field prediction: "
f"corr = {corr_mean:.4f}, rel.err = {re_mean:.4f}")
print("\n" + "=" * 64)
thresh = 0.50
print(f"{'Method':<10} {'Val rel.err':>12} {'Test rel.err':>13} "
f"{'Horizon(s)':>10} {'RMSE':>8} {'Corr':>6} {'R2':>7}")
print("-" * 66)
rmse_list = []
corr_list = []
r2_list = []
records = []
_complexity = {
"DMD": "O(r²n + r³) / O(r²)",
"SINDy": "O(r²n) / O(r²)",
"LSTM": "O(E·n·s·h²) / O(s·h²)",
}
_train_times = {"DMD": dmd_train_time, "SINDy": sindy_train_time, "LSTM": lstm_train_time}
_infer_times = {"DMD": dmd_infer_time, "SINDy": sindy_infer_time, "LSTM": lstm_infer_time}
method_results = [
("DMD", re_dmd_val, re_dmd, X_dmd),
("SINDy", re_sindy_val, re_sindy, X_sindy),
]
if re_lstm is not None and re_lstm_val is not None and X_lstm is not None:
method_results.append(("LSTM", re_lstm_val, re_lstm, X_lstm))
for name, re_val, re, Xp in method_results:
ph = prediction_horizon(re, threshold=thresh, dt=DT)
rmse = compute_rmse(X_test, Xp)
corr = compute_correlation(X_test, Xp)
r2 = compute_r2(X_test, Xp)
rmse_list.append(float(rmse))
corr_list.append(corr)
r2_list.append(r2)
records.append({"name": name, "val_re": re_val.mean(),
"test_re": re.mean(), "horizon": ph,
"rmse": float(rmse), "corr": corr, "r2": r2,
"train_time": _train_times[name],
"infer_time": _infer_times[name],
"complexity": _complexity[name]})
print(f"{name:<10} {re_val.mean():>12.4f} {re.mean():>13.4f} "
f"{ph:>8.1f} s {rmse:>8.4f} {corr:>6.4f} {r2:>7.4f}")
horizon_list = [r["horizon"] for r in records]
metrics_data = {"methods": [r["name"] for r in records], "rmse": rmse_list,
"corr": corr_list, "horizon": horizon_list}
print("\nSweeping correlation vs POD modes …")
r_values = [10, 20, 30, 40, 50]
corr_vs_r = {"r": r_values, "DMD": [], "SINDy": [], "LSTM": []}
for r_sweep in r_values:
r_d = min(r_sweep, R_DMD) if r_sweep < R_DMD else R_DMD
r_d = r_sweep
d_delay = DMD_DELAY
Ztr_d = Z_train[:, :r_d]
Zval_d = Z_val[:, :r_d]
Ztest_d = Z_test[:, :r_d]
dmd_s = DMD(n_modes=None, stabilise=True, delay=d_delay)
dmd_s.fit(Ztr_d)
if RECEDING_ONE_STEP:
ref = np.vstack([Zval_d[-(d_delay + 1):], Ztest_d])
Zpd = np.empty((nt_test, r_d))
for t in range(nt_test):
Zpd[t] = dmd_s.predict(1, z0=ref[t:t + d_delay + 1])[0]
else:
Zpd = dmd_s.predict(nt_test, z0=Zval_d[-(d_delay + 1):])
Zpad = np.zeros((nt_test, N_POD)); Zpad[:, :r_d] = Zpd
corr_vs_r["DMD"].append(compute_correlation(X_test, pod.inverse_transform(Zpad)))
sindy_s = SINDy(dt=DT, poly_degree=2, threshold=0.005, ridge_alpha=1e-4,
n_iter=20, n_sub=10, discrete=True, clip_sigma=1.8)
sindy_s.fit(Z_train[:, :r_sweep])
if RECEDING_ONE_STEP:
ref_s = np.vstack([Z_val[-1:, :r_sweep], Z_test[:, :r_sweep]])
Zps = np.empty((nt_test, r_sweep))
for t in range(nt_test):
Zps[t] = sindy_s.predict(1, z0=ref_s[t])[0]
else:
Zps = sindy_s.predict(nt_test, z0=Z_val[-1, :r_sweep])
Zpad_s = np.zeros((nt_test, N_POD)); Zpad_s[:, :r_sweep] = Zps
corr_vs_r["SINDy"].append(compute_correlation(X_test, pod.inverse_transform(Zpad_s)))
try:
lstm_s = LSTMPredictor(
seq_len=LSTM_SEQ, n_features=r_sweep,
hidden_size=LSTM_HIDDEN, num_layers=LSTM_LAYERS,
dropout=LSTM_DROPOUT, learning_rate=LSTM_LR,
epochs=LSTM_EPOCHS, batch_size=LSTM_BATCH,
patience=LSTM_PATIENCE, verbose=0,
)
lstm_s.fit(Z_train[:, :r_sweep], Z_val[:, :r_sweep])
if RECEDING_ONE_STEP:
ref_l = np.vstack([Z_val[-LSTM_SEQ:, :r_sweep], Z_test[:, :r_sweep]])
win_l = np.stack([ref_l[t:t + LSTM_SEQ] for t in range(nt_test)], axis=0)
Zpl = lstm_s.predict_windows(win_l)
else:
Zpl = lstm_s.predict(nt_test, z0=Z_val[-LSTM_SEQ:, :r_sweep])
Zpad_l = np.zeros((nt_test, N_POD)); Zpad_l[:, :r_sweep] = Zpl
corr_vs_r["LSTM"].append(compute_correlation(X_test, pod.inverse_transform(Zpad_l)))
except Exception:
corr_vs_r["LSTM"].append(float("nan"))
print(f" r={r_sweep:>2}: DMD={corr_vs_r['DMD'][-1]:.4f}"
f" SINDy={corr_vs_r['SINDy'][-1]:.4f}"
f" LSTM={corr_vs_r['LSTM'][-1]:.4f}")
print("\nGenerating report figure …")
plot.plot_report_figure(
pod=pod,
rel_err_dmd=re_dmd,
rel_err_sindy=re_sindy,
rel_err_lstm=re_lstm,
rel_err_pod=re_rec_per,
corr_vs_r=corr_vs_r,
X_test=X_test,
X_dmd_pred=X_dmd,
X_sindy_pred=X_sindy,
X_lstm_pred=X_lstm,
metrics_data=metrics_data,
nt_test=nt_test,
dt=DT,
snapshot_idx=SNAP_IDX,
nx=nx,
ny=ny,
nc=nc,
save_path=SAVE_FIG,
)
elapsed = time.perf_counter() - t_wall
print(f"\nTotal wall-clock time: {elapsed / 60:.1f} min")
_write_results_txt(
path=SAVE_TXT,
records=records,
pod_energy=ce[-1] * 100,
elapsed=elapsed,
n_sp=n_sp,
)
print("=" * 64)
if __name__ == "__main__":
main()