Rework some tests for shorter CI runs #1820
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| name: Documentation | |
| on: | |
| push: | |
| branches: [ devel ] | |
| paths: | |
| - 'README.md' | |
| - 'docs/**' | |
| - 'psydac/**.py' | |
| pull_request: | |
| branches: [ devel, main ] | |
| types: | |
| - ready_for_review | |
| workflow_dispatch: | |
| permissions: | |
| contents: read | |
| pages: write | |
| id-token: write | |
| jobs: | |
| build_docs: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN}} | |
| OMP_NUM_THREADS: 2 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v5 | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.10' | |
| - name: Install non-Python dependencies on Ubuntu | |
| uses: awalsh128/cache-apt-pkgs-action@latest | |
| with: | |
| packages: gfortran openmpi-bin libopenmpi-dev libhdf5-openmpi-dev | |
| version: 1.0 | |
| execute_install_scripts: true | |
| - name: Reconfigure non-Python dependencies on Ubuntu | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install --reinstall openmpi-bin libhdf5-openmpi-dev liblapack-dev libblas-dev | |
| sudo apt install graphviz pandoc | |
| - name: Print information on MPI and HDF5 libraries | |
| run: | | |
| ompi_info | |
| h5pcc -showconfig -echo || true | |
| - name: Upgrade pip, setuptools, and wheel | |
| run: | | |
| pip install --upgrade pip setuptools wheel | |
| - name: Cache PETSc | |
| uses: actions/cache@v4 | |
| id: cache-petsc | |
| env: | |
| cache-name: cache-PETSc | |
| with: | |
| path: "./petsc" | |
| key: petsc-${{ matrix.os }}-${{ matrix.python-version }} | |
| - if: steps.cache-petsc.outputs.cache-hit != 'true' | |
| name: Download a specific release of PETSc | |
| run: | | |
| git clone --depth 1 -b release https://gitlab.com/petsc/petsc.git | |
| # when a tag will be available for the latest release we can install with | |
| # git clone --depth 1 --branch v*.**.* https://gitlab.com/petsc/petsc.git | |
| - if: steps.cache-petsc.outputs.cache-hit != 'true' | |
| name: Install PETSc with complex support | |
| working-directory: ./petsc | |
| run: | | |
| export PETSC_DIR=$(pwd) | |
| export PETSC_ARCH=petsc-cmplx | |
| ./configure --with-scalar-type=complex --with-fortran-bindings=0 --have-numpy=1 | |
| make all | |
| echo "PETSC_DIR=$PETSC_DIR" > petsc.env | |
| echo "PETSC_ARCH=$PETSC_ARCH" >> petsc.env | |
| # This step is not really necessary and could be combined with PETSc install | |
| # step; however it's good to verify if the cached PETSc installation really works! | |
| - name: Test PETSc installation | |
| working-directory: ./petsc | |
| run: | | |
| source petsc.env | |
| make check | |
| echo "PETSC_DIR=$PETSC_DIR" >> $GITHUB_ENV | |
| echo "PETSC_ARCH=$PETSC_ARCH" >> $GITHUB_ENV | |
| - name: Install petsc4py | |
| working-directory: ./petsc | |
| run: | | |
| pip install wheel Cython numpy | |
| pip install src/binding/petsc4py | |
| - name: Install h5py in parallel mode | |
| uses: ./.github/actions/parallel_h5py | |
| - name: Install project | |
| run: | | |
| pip install .[test] | |
| pip freeze | |
| - name: Install Python dependencies for Documentation | |
| run: | | |
| pip install -r docs/requirements.txt | |
| - name: Make the sphinx doc | |
| run: | | |
| rm -rf docs/source/modules/STUBDIR | |
| make -C docs clean | |
| make -C docs html | |
| python docs/update_links.py | |
| - name: Setup Pages | |
| uses: actions/configure-pages@v5 | |
| - name: Upload artifact | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: 'docs/build/html' | |
| deploy_docs: | |
| if: github.event_name == 'push' && github.ref == 'refs/heads/devel' | |
| needs: build_docs | |
| runs-on: ubuntu-latest | |
| environment: | |
| name: github-pages | |
| url: ${{ steps.deployment.outputs.page_url }} | |
| steps: | |
| - name: Deploy to GitHub Pages | |
| id: deployment | |
| uses: actions/deploy-pages@v4 |