Enhancement/2d ampdet kicks (#379)

* 2D ODR fit
* analysis in 4D, plotting in 3D
* typehints and doc
* update linfile headers
* fixing depracated indexing
* fixing timeseries interpolation problems
* converter bbs-omc3
* fix switched planes in coefficient output
* allow different sized kickfiles
* filter nans for 2D analysis
* bbq cleaning shortcut
* fixing path/str types
* changelog and version
* use of DataClasses for filter options
* odr logging improvement
* Polynomial fit

Author: JoschD

CHANGELOG.md

@@ -1,43 +1,58 @@
 # OMC3 Changelog
 
-#### 2022-05-19
+#### 2022-05-30 - v0.4.0 - _jdilly_
+
+- Added: 
+  - 2D amplitude detuning analysis and 3D plotting of the results
+  - Converter for amp.det. analysis from bbs to omc3
+  - general typehinting/doc/unification of entrypoint parameters/saving
+
+- Fixed:
+  - Switched action-tune planes in ampdet-kick file header-names
+  - Deprecated way of pandas indexing (`.loc` for nearest points)
+  - Allow different sized kick-files for amp.det. analysis
+
+#### 2022-05-19 - v0.3.0 - _jdilly_
 
 - Added:
   - Linfile cleaning script. 
 
-#### 2022-04-25
+#### 2022-04-25 - v0.2.7 - _awegshe_
 
 - Added:
   - There is now an option, `coupling_pairing`, for the BPM pairing in coupling calculation, to let the user choose the number of BPMs instead of the usual "best candidate" method.
 
-#### 2022-04-25
+#### 2022-04-25 - v0.2.6 - _awegsche_
 
 - Fixed:
   - Only perform index merging on the `NAME` column during coupling calculation. This solves an (at the moment) un-understood issue where some BPMs would have different `S` values in different files.
 
-#### 2022-04-12
+#### 2022-04-12 - v0.2.5 - _awegsche_
 
 - Fixed:
-  - An additionnal knob and macros definition file has been added to reflect the knobs used by OP in the LHC Run 3. This makes sure any `omc3.model_creator` run for the LHC with `year >= 2022` has correct knobs.
+  - An additional knob and macros definition file has been added to reflect the knobs used by OP in the LHC Run 3. This makes sure any `omc3.model_creator` run for the LHC with `year >= 2022` has correct knobs.
 
-#### 2022-04-07
+#### 2022-04-07 - v0.2.4 - _fsoubelet_
 
 - Miscellaneous:
   - The jpype1 package is not a default dependency anymore, and is instead included as a dependency in the cern and test extras. Its import is mocked where needed in omc3.
 
-#### 2022-02-23
+#### 2022-02-23 - v0.2.3 - _awegsche_
 
 - Fixed:
   - The coupling calculation now includes additional columns in the output dataframes, which were missing while being needed later on by the correction calculation.
 
-#### 2022-01-10
+#### 2022-01-10 - v0.2.2 - _mihofer_
 
 - Fixed:
   - Sequences for K-Modulation are now included in PyPi package
   - Bug fixed where default errors in K-Modulation would not have been taken into account
 
-#### 2021-07-14 
-_by jdilly_
+#### 2022-01-10 - v0.2.1 - _fsoubelet_
+
+- _Dummy Release for Zenodo_
+
+#### 2021-07-14 - v0.2.0 - _jdilly_
 
 - Added:
   - global correction framework

omc3/__init__.py

@@ -11,7 +11,7 @@
 __title__ = "omc3"
 __description__ = "An accelerator physics tools package for the OMC team at CERN."
 __url__ = "https://github.com/pylhc/omc3"
-__version__ = "0.3.0"
+__version__ = "0.4.0"
 __author__ = "pylhc"
 __author_email__ = "[email protected]"
 __license__ = "MIT"